RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR13C9Q8NGT0 318 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 PPP1R35Q8TAP8 253 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 GPR148Q8TDV2 347 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 METTL8Q9H825 291 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 ZNF222Q9UK12 451 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 MAB21L2Q9Y586 359 aa13.01□□□□□ -0.33
TSPAN4-201ENST00000346501 CENPVL3A0A0U1RRI6 287 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 ERICH4A6NGS2 130 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 MT-ND2P03891 347 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 LIMS3P0CW19 117 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 LIMS4P0CW20 117 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 ERVK11-1P61568 191 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 RPL31P62899 125 aaKnown RBP13□□□□□ -0.33
TSPAN4-201ENST00000346501 GDPD3Q7L5L3 318 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 BATF2Q8N1L9 274 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 FGFRL1Q8N441 504 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 ZDHHC22Q8N966 263 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
TSPAN4-201ENST00000346501 PDCD1LG2Q9BQ51 273 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 RHOFQ9HBH0 211 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 BABAM2Q9NXR7 383 aa13□□□□□ -0.33
TSPAN4-201ENST00000346501 CNOT2Q9NZN8 540 aaKnown RBP13□□□□□ -0.33
TSPAN4-201ENST00000346501 DNAJC9-AS1A6NH13 148 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 HAX1O00165 279 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 MYL12BO14950 172 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 SULT1B1O43704 296 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 ALX3O95076 343 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 TFF1P04155 84 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 TK1P04183 234 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 CRYBA1P05813 215 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 PIPP12273 146 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 RAB3AP20336 220 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 ETV1P50549 477 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 TAS2R43P59537 309 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 PDZK1IP1Q13113 114 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 DEFB112Q30KQ8 113 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 METAP1DQ6UB28 335 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 FAM58AQ8N1B3 248 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 PARP16Q8N5Y8 322 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 CD177Q8N6Q3 437 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 OR51A4Q8NGJ6 313 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 OR10AC1Q8NH08 325 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 OR52N1Q8NH53 320 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 GPER1Q99527 375 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 SIRT7Q9NRC8 400 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
TSPAN4-201ENST00000346501 IGKV1-27A0A075B6S5 117 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 IGKV1-9A0A0C4DH69 117 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 BTBD17A6NE02 478 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 E9PI62 339 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 CLDN34H7C241 214 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SH2D1BO14796 132 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 FCN3O75636 299 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 PAHP00439 452 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 TMEM225BP0DP42 221 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 PRKACAP17612 351 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 CEBPDP49716 269 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 PPP3R1P63098 170 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 COL10A1Q03692 680 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SPIN3Q5JUX0 258 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 OR2G6Q5TZ20 316 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 RUSC1-AS1Q66K80 236 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SAXO1Q8IYX7 474 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 BPIFB6Q8NFQ5 453 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SNX22Q96L94 193 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 DUX5Q96PT3 197 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 ZNF649Q9BS31 505 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 HEXA-AS1Q9H8Q6 139 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 ESM1Q9NQ30 184 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 CKLFQ9UBR5 152 aa12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-201ENST00000346501 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 H0YJX3 145 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 K7N7A8 449 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 SPRY1O43609 319 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 HAND1O96004 215 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 RNASE1P07998 156 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 FBP1P09467 338 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 GABRR1P24046 479 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 SOX2P48431 317 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 BMXP51813 675 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 GTF2A1P52655 376 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 EDDM3BP56851 147 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 FOXL1Q12952 345 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 SSMEM1Q8WWF3 244 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 GGHQ92820 318 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 SMIM19Q96E16 107 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 ZNF48Q96MX3 618 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 S100A13Q99584 98 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 DPAGT1Q9H3H5 408 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 SEBOXQ9HB31 216 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 PLCXD1Q9NUJ7 323 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms