RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZIC1Q15915 447 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 RABEPKQ7Z6M1 372 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 M1APQ8TC57 530 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 MRPL24Q96A35 216 aaKnown RBP15.52■□□□□ 0.08
SPAST-202ENST00000345662 OR10C1Q96KK4 312 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 SOCS1O15524 211 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 PIAS2O75928 621 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 GYPAP02724 150 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 GNG4P50150 75 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 MICBQ29980 383 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 STUMQ69YW2 141 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 H1FXQ92522 213 aaKnown RBP15.52■□□□□ 0.08
SPAST-202ENST00000345662 MS4A3Q96HJ5 214 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 ZNF391Q9UJN7 358 aa15.52■□□□□ 0.08
SPAST-202ENST00000345662 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.08
SPAST-202ENST00000345662 TEX50A0A1B0GTY4 177 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 COX7A2P2O60397 106 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 GPM6AP51674 278 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 EFNB2P52799 333 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 METAP1P53582 386 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 INSM1Q01101 510 aaPredicted RBP15.52■□□□□ 0.07
SPAST-202ENST00000345662 MYBPHQ13203 477 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 ATP6V1FQ16864 119 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 MPV17LQ2QL34 196 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 DPPA3Q6W0C5 159 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 ATOH1Q92858 354 aaPredicted RBP15.52■□□□□ 0.07
SPAST-202ENST00000345662 CD1AP06126 327 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 SULT1A2P50226 295 aa15.52■□□□□ 0.07
SPAST-202ENST00000345662 TSEN54Q7Z6J9 526 aaKnown RBP15.52■□□□□ 0.07
SPAST-202ENST00000345662 CTSVO60911 334 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 TMEM11P17152 192 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 HLA-GP17693 338 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR5I1Q13606 314 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 FAM181AQ8N9Y4 354 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR10G3Q8NGC4 313 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 KCNE4Q8WWG9 221 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 ZNF835Q9Y2P0 537 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 SMCHD1A6NHR9 2005 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 EIF3GO75821 320 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPAST-202ENST00000345662 C1QCP02747 245 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 FGF2P09038 288 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 MESTQ5EB52 335 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR5AU1Q8NGC0 362 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR10AC1Q8NH08 325 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 CD160O95971 181 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 RPS16P62249 146 aaKnown RBP15.51■□□□□ 0.07
SPAST-202ENST00000345662 PAX5Q02548 391 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 PET117Q6UWS5 81 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 LRP11Q86VZ4 500 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 ZNF707Q96C28 371 aaPredicted RBP15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR2A5Q96R48 311 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 MPZL1O95297 269 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 EWSR1Q01844 656 aaKnown RBP eCLIP15.51■□□□□ 0.07
SPAST-202ENST00000345662 OR1N1Q8NGS0 311 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 C8orf44Q96CB5 159 aa15.51■□□□□ 0.07
SPAST-202ENST00000345662 PTP4A3O75365 173 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 FBP1P09467 338 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 LINC00696Q6ZRV3 163 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 TMEM147Q9BVK8 224 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 ANGPTL4Q9BY76 406 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 TLNRD1Q9H1K6 362 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 GSX1Q9H4S2 264 aaPredicted RBP15.5■□□□□ 0.07
SPAST-202ENST00000345662 KLRC4-KLRK1H3BQV0 150 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 PLPP3O14495 311 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 CCR2P41597 374 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 TSPO2Q5TGU0 170 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 ZNF880Q6PDB4 577 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 SCCPDHQ8NBX0 429 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 ASB5Q8WWX0 329 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 ELOVL1Q9BW60 279 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 HOXB3P14651 431 aaPredicted RBP15.5■□□□□ 0.07
SPAST-202ENST00000345662 RCC1P18754 421 aaPredicted RBP15.5■□□□□ 0.07
SPAST-202ENST00000345662 ZNF547Q8IVP9 402 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 VN1R4Q7Z5H5 301 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 TRIP11Q15643 1979 aa15.5■□□□□ 0.07
SPAST-202ENST00000345662 TNFSF11O14788 317 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 LPAR6P43657 344 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 ELOBQ15370 118 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 COX19Q49B96 90 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 TMEM215Q68D42 235 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 MRGPRGQ86SM5 289 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 OR10G8Q8NGN5 311 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 SDHCQ99643 169 aaPredicted RBP15.49■□□□□ 0.07
SPAST-202ENST00000345662 ZNF253O75346 499 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CYC1P08574 325 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CT62P0C5K7 136 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CEACAM16Q2WEN9 425 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CBLN3Q6UW01 205 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 PRSS41Q7RTY9 318 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 APOBEC3DQ96AK3 386 aaPredicted RBP15.49■□□□□ 0.07
SPAST-202ENST00000345662 ZNF552Q9H707 407 aaPredicted RBP15.49■□□□□ 0.07
SPAST-202ENST00000345662 SLC45A2Q9UMX9 530 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 NDUFB7P17568 137 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 VDAC1P21796 283 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 GFERP55789 205 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 ALKBH3Q96Q83 286 aaPredicted RBP15.49■□□□□ 0.07
SPAST-202ENST00000345662 FOXB1Q99853 325 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 GOLT1BQ9Y3E0 138 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 LRRC30A6NM36 301 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms