RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SDK2Q58EX2 2172 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 MROH1Q8NDA8 1641 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 RBFOX3A6NFN3 312 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 DIRC3C9JPN6 131 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 CSNK1DP48730 415 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 DLK1P80370 383 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 HYAL1Q12794 435 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 RNPS1Q15287 305 aaKnown RBP15.86■□□□□ 0.13
SMAD4-201ENST00000342988 ZNF511Q8NB15 262 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 TMEM215Q68D42 235 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 VN1R17PQ8TDU5 208 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 GEMIN7Q9H840 131 aaKnown RBP15.86■□□□□ 0.13
SMAD4-201ENST00000342988 CDC20Q12834 499 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 IL13RA2Q14627 380 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 GPNMBQ14956 572 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 A0A1B0GVG6 124 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 RAB29O14966 203 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 TYMSP04818 313 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 ERVFRD-1P60508 538 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 GNG3P63215 75 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 FOXO1Q12778 655 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 SLC25A30Q5SVS4 291 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 ADAMTSL4Q6UY14 1074 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 OR10G4Q8NGN3 311 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 OR10G9Q8NGN4 311 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 OR10G7Q8NGN6 311 aa15.86■□□□□ 0.13
SMAD4-201ENST00000342988 PHLDA1Q8WV24 401 aaPredicted RBP15.86■□□□□ 0.13
SMAD4-201ENST00000342988 MAST2Q6P0Q8 1798 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 hADV38S2A0JD32 116 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 LRRC3BQ96PB8 259 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 FAM219AQ8IW50 185 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 SAP30LQ9HAJ7 183 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 EP300Q09472 2414 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-201ENST00000342988 FOXA1P55317 472 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 ZNF77Q15935 545 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 KCNMB1Q16558 191 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 CTF1Q16619 201 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 ZNF441Q8N8Z8 693 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 SLC52A3Q9NQ40 469 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 COL1A1P02452 1464 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-201ENST00000342988 H3BP45 60 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 RECKO95980 971 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 ASCL1P50553 236 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 SNRPEP62304 92 aaKnown RBP15.85■□□□□ 0.13
SMAD4-201ENST00000342988 PWWP2BQ6NUJ5 590 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 TRILQ7L0X0 811 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 TEX29Q8N6K0 151 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 NPWQ8N729 165 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 PXDNQ92626 1479 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 F2RL2O00254 374 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 HKR1P10072 659 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 FUNDC1Q8IVP5 155 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 ARIH2OSQ8N7S6 290 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 GLIPR2Q9H4G4 154 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 JUNBP17275 347 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-201ENST00000342988 TNFSF10P50591 281 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 NKAIN1Q4KMZ8 207 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 DPPA3Q6W0C5 159 aa15.85■□□□□ 0.13
SMAD4-201ENST00000342988 PRSS37A4D1T9 235 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 JMJD6Q6NYC1 403 aaPredicted RBP15.84■□□□□ 0.13
SMAD4-201ENST00000342988 LYG1Q8N1E2 194 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 M0R082 166 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 ANKRD10Q9NXR5 420 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 SLCO1C1Q9NYB5 712 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 GFRA2O00451 464 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 KLF3P57682 345 aaPredicted RBP15.84■□□□□ 0.13
SMAD4-201ENST00000342988 BTG2P78543 158 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 LIPNQ5VXI9 398 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 FUT3P21217 361 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 C10orf128Q5T292 105 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 DHRS4L2Q6PKH6 230 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 PKIBQ9C010 78 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 CCR2P41597 374 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 SLC25A42Q86VD7 318 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 SPSB1Q96BD6 273 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 MRGPRX4Q96LA9 322 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 LOC389332A0A1B0GUA5 103 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 RER1O15258 196 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 SLC2A10O95528 541 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 THBS4P35443 961 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 PARD6GQ9BYG4 376 aaPredicted RBP15.84■□□□□ 0.13
SMAD4-201ENST00000342988 GP1BAP07359 652 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 NAT1P18440 290 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 RAC3P60763 192 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 CA5BP1Q8WTZ4 195 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 DIRC2Q96SL1 478 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 NUDT16L1Q9BRJ7 211 aaKnown RBP15.84■□□□□ 0.13
SMAD4-201ENST00000342988 SLC46A2Q9BY10 475 aa15.84■□□□□ 0.13
SMAD4-201ENST00000342988 PMCHL1Q16048 86 aa15.83■□□□□ 0.13
SMAD4-201ENST00000342988 PAPPA-AS1Q5QFB9 102 aa15.83■□□□□ 0.13
SMAD4-201ENST00000342988 NKAIN2Q5VXU1 208 aa15.83■□□□□ 0.13
SMAD4-201ENST00000342988 RPS19BP1Q86WX3 136 aaKnown RBP15.83■□□□□ 0.13
SMAD4-201ENST00000342988 FAM3BP58499 235 aaPredicted RBP15.83■□□□□ 0.13
SMAD4-201ENST00000342988 HSD11B1LQ7Z5J1 315 aa15.83■□□□□ 0.13
SMAD4-201ENST00000342988 ZNF665Q9H7R5 613 aa15.83■□□□□ 0.13
SMAD4-201ENST00000342988 A0A096LPE4 126 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 A0A1W2PPZ6 126 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 OR4C45A6NMZ5 311 aa15.83■□□□□ 0.12
SMAD4-201ENST00000342988 NPBWR2P48146 333 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms