RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 RAB18Q9NP72 206 aa17.44■□□□□ 0.38
SPG7-202ENST00000341316 hCG_38984A0A1B0GV85 526 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 FAM166BA8MTA8 275 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 F12P00748 615 aaPredicted RBP17.43■□□□□ 0.38
SPG7-202ENST00000341316 NRASP01111 189 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 FAM157CP0CG43 387 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 EDN3P14138 238 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 RPS2P15880 293 aaKnown RBP17.43■□□□□ 0.38
SPG7-202ENST00000341316 CLDN18P56856 261 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 RSU1Q15404 277 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 CHRFAM7AQ494W8 412 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 SLC7A10Q9NS82 523 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 NOSIPQ9Y314 301 aaKnown RBP17.43■□□□□ 0.38
SPG7-202ENST00000341316 ZNF175Q9Y473 711 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 TTC28Q96AY4 2481 aa17.43■□□□□ 0.38
SPG7-202ENST00000341316 PCP4L1A6NKN8 68 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 MAGEA5P43359 124 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 OR1C1Q15619 314 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 DCAF10Q5QP82 559 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 C10orf91Q5T1B1 145 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 C9orf135Q5VTT2 229 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 ZNF585AQ6P3V2 769 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 PRSS54Q6PEW0 395 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 LINC00696Q6ZRV3 163 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 ADAMTS17Q8TE56 1095 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 TMEM45BQ96B21 275 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 CNTNAP3BQ96NU0 1288 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 TLNRD1Q9H1K6 362 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 TREM1Q9NP99 234 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 CA11O75493 328 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 RBP2P50120 134 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 FOXG1P55316 489 aaPredicted RBP17.42■□□□□ 0.38
SPG7-202ENST00000341316 PCBD1P61457 104 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 CNN3Q15417 329 aaKnown RBP17.42■□□□□ 0.38
SPG7-202ENST00000341316 MST1LQ2TV78 715 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 OR10C1Q96KK4 312 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 GPR87Q9BY21 358 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 MMP26Q9NRE1 261 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 IL17BQ9UHF5 180 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 CARHSP1Q9Y2V2 147 aaKnown RBP17.42■□□□□ 0.38
SPG7-202ENST00000341316 FREM1Q5H8C1 2179 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 LOC400499M0QZD8 3231 aa17.42■□□□□ 0.38
SPG7-202ENST00000341316 IGKV3D-15A0A087WSY6 115 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 CSTBP04080 98 aaKnown RBP17.41■□□□□ 0.38
SPG7-202ENST00000341316 ITGA3P26006 1051 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 RRADP55042 308 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 BRICD5Q6PL45 260 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 TMEM200AQ86VY9 491 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 OR51F2Q8NH61 342 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 DYRK2Q92630 601 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 BORCS8Q96FH0 119 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 TTTY12Q9BZ98 90 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 OR2S2Q9NQN1 319 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 MLXQ9UH92 298 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 AK3Q9UIJ7 227 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 FAM186AA6NE01 2351 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 ZNF705EA8MWA4 302 aaPredicted RBP17.41■□□□□ 0.38
SPG7-202ENST00000341316 MRPL33O75394 65 aaKnown RBP17.41■□□□□ 0.38
SPG7-202ENST00000341316 MT-CO3P00414 261 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 LYL1P12980 280 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 PIGYQ3MUY2 71 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 ASCL4Q6XD76 172 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 TUSC5Q8IXB3 177 aa17.41■□□□□ 0.38
SPG7-202ENST00000341316 METTL8Q9H825 291 aaKnown RBP17.41■□□□□ 0.38
SPG7-202ENST00000341316 KLF2Q9Y5W3 355 aaPredicted RBP17.41■□□□□ 0.38
SPG7-202ENST00000341316 ZNF407Q9C0G0 2248 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 C21orf140B9A014 251 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 PVALBP20472 110 aaPredicted RBP17.4■□□□□ 0.38
SPG7-202ENST00000341316 ARF1P84077 181 aaKnown RBP17.4■□□□□ 0.38
SPG7-202ENST00000341316 RAB32Q13637 225 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 ARL6IP1Q15041 203 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 STK11Q15831 433 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 DHRS13Q6UX07 377 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 LHFPL2Q6ZUX7 228 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 SULT4A1Q9BR01 284 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 LIME1Q9H400 295 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 URB1O60287 2271 aaKnown RBP17.4■□□□□ 0.38
SPG7-202ENST00000341316 A0A096LPE4 126 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 A0A1W2PPZ6 126 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 NUDT19A8MXV4 375 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 PPA1Q15181 289 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 OR8B8Q15620 311 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 TMEM164Q5U3C3 297 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 DHRS7BQ6IAN0 325 aaPredicted RBP17.4■□□□□ 0.38
SPG7-202ENST00000341316 ZNF100Q8IYN0 542 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 SCGB3A2Q96PL1 93 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 AQP10Q96PS8 301 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 R4GN57 208 aa17.4■□□□□ 0.38
SPG7-202ENST00000341316 GEMIN2O14893 280 aaKnown RBP17.39■□□□□ 0.37
SPG7-202ENST00000341316 KNG1P01042 644 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 SFTPBP07988 381 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 OPRM1P35372 400 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 NPBWR1P48145 328 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 PJVKQ0ZLH3 352 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 SPAG16Q8N0X2 631 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 FNDC9Q8TBE3 224 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 PIGCQ92535 297 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 ZNF2Q9BSG1 426 aaPredicted RBP17.39■□□□□ 0.37
SPG7-202ENST00000341316 C1QTNF5Q9BXJ0 243 aa17.39■□□□□ 0.37
SPG7-202ENST00000341316 CALHM2Q9HA72 323 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms