RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FOXB1Q99853 325 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 WDR13Q9H1Z4 485 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 MTCH1Q9NZJ7 389 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 PILRAQ9UKJ1 303 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 MASP2O00187 686 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 OR8U1Q8NH10 309 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 ANK1P16157 1881 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 PLXNA1Q9UIW2 1896 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF638Q14966 1978 aaKnown RBP13.11□□□□□ -0.31
RRP1B-201ENST00000340648 SPINT2O43291 252 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 TTRP02766 147 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 CD63P08962 238 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 MPGP29372 298 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 RAB35Q15286 201 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF573Q86YE8 665 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 RALGAPA2Q2PPJ7 1873 aa13.11□□□□□ -0.31
RRP1B-201ENST00000340648 A0A1W2PP11 408 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 A6NCN8 305 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 DYNLT3P51808 116 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 GPX7Q96SL4 187 aaPredicted RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 GABRG3Q99928 467 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 PDCD6O75340 191 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 P2RY1P47900 373 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 CLDN15P56746 228 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 LINC01590Q5TEZ4 76 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 VHLLQ6RSH7 139 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 SLC35G3Q8N808 338 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 HDHD3Q9BSH5 251 aaPredicted RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF816Q0VGE8 651 aaPredicted RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 TBC1D28Q2M2D7 210 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 PTX4Q96A99 478 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
RRP1B-201ENST00000340648 SARGQ9BW04 601 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 IGHEP01854 428 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 MBP02144 154 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 IL9P15248 144 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 DLK1P80370 383 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 LIAT1Q6ZQX7 453 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF383Q8NA42 475 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 ZDHHC11Q9H8X9 412 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
RRP1B-201ENST00000340648 XKRY2A2RUG3 117 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 YIF1AO95070 293 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 BTNL8Q6UX41 500 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 B3GAT1Q9P2W7 334 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 MTCH2Q9Y6C9 303 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 A8MXK9 166 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SLC25A6P12236 298 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF32P17041 273 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 FSTP19883 344 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 C9orf50Q5SZB4 431 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SPRED2Q7Z698 418 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 OIT3Q8WWZ8 545 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 ERRFI1Q9UJM3 462 aaPredicted RBP13.09□□□□□ -0.31
RRP1B-201ENST00000340648 TBX6O95947 436 aaPredicted RBP13.09□□□□□ -0.31
RRP1B-201ENST00000340648 IL11P20809 199 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 MZT1Q08AG7 82 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 FAM209BQ5JX69 171 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 ZNRF4Q8WWF5 429 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 BRWD1Q9NSI6 2320 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 H3BQ15 152 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 NTF3P20783 257 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 PAX6P26367 422 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 GALR1P47211 349 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 ZNF468Q5VIY5 522 aaPredicted RBP13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SLC36A1Q7Z2H8 476 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 DYRK2Q92630 601 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SNX22Q96L94 193 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SLC26A1Q9H2B4 701 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 RIMS4Q9H426 269 aaPredicted RBP13.09□□□□□ -0.31
RRP1B-201ENST00000340648 SLC2A9Q9NRM0 540 aa13.09□□□□□ -0.31
RRP1B-201ENST00000340648 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.31
RRP1B-201ENST00000340648 AQP7O14520 342 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 SH2D1BO14796 132 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 FZD5Q13467 585 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 FAM58AQ8N1B3 248 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 CLDN23Q96B33 292 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 DUSP13Q9UII6 198 aa13.08□□□□□ -0.31
RRP1B-201ENST00000340648 MPTX1A8MV57 137 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 GEMIN2O14893 280 aaKnown RBP13.08□□□□□ -0.32
RRP1B-201ENST00000340648 YKT6O15498 198 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 C1QL1O75973 258 aa13.08□□□□□ -0.32
RRP1B-201ENST00000340648 KRASP01116 189 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms