RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 H7C1Q1 480 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 VAMP5O95183 116 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 CST4P01036 141 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 IFNA17P01571 189 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 H2AFB1P0C5Y9 115 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 PGA4P0DJD7 388 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 PGA3P0DJD8 388 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 UBE2V2Q15819 145 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 RTL6Q6ICC9 239 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 HLA-CQ95604 372 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 ZNF837Q96EG3 531 aaPredicted RBP9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 REG4Q9BYZ8 158 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 TRAPPC2LQ9UL33 140 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 KPTNQ9Y664 436 aa9.72□□□□□ -0.85
SEMA4D-201ENST00000339861 CCDC187A0A096LP49 1063 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 A0A1W2PPH5 198 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 ANKRD30BLA7E2S9 258 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 CLPSP04118 112 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 LPAR6P43657 344 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 CYB561P49447 251 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 DUSP3P51452 185 aaPredicted RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 SNAI3Q3KNW1 292 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 FDX2Q6P4F2 183 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 CLCC1Q96S66 551 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 NMES1Q9C002 83 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 FAM234AQ9H0X4 552 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 MED9Q9NWA0 146 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 B4GALT7Q9UBV7 327 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 ZNF407Q9C0G0 2248 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 TAAR5O14804 337 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 TRAF3IP2O43734 574 aaPredicted RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 OR2C1O95371 312 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 ZNF735P0CB33 412 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 ALDH3B1P43353 468 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 NOVA1P51513 510 aaKnown RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 PCBD1P61457 104 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 ZNF345Q14585 488 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 UQCC3Q6UW78 93 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 SPEM1Q8N4L4 309 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 OR6S1Q8NH40 331 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 NINJ1Q92982 152 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 THOC3Q96J01 351 aaKnown RBP9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 PLA2G3Q9NZ20 509 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 TIMM10BQ9Y5J6 103 aa9.71□□□□□ -0.85
SEMA4D-201ENST00000339861 CD74P04233 296 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 ISG15P05161 165 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 APLNRP35414 380 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 KMT5CQ86Y97 462 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 OR56B2PQ8NGI1 322 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 ABHD3Q8WU67 409 aa9.71□□□□□ -0.86
SEMA4D-201ENST00000339861 ARPC4-TTLL3A0A0A6YYG9 625 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 IGHV5-10-1A0A0J9YXX1 117 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A1W2PR77 199 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 FTCDNL1E5RQL4 147 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 GRPP07492 148 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 GLULP15104 373 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 DMWDQ09019 674 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 THNSL2Q86YJ6 484 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 CADM4Q8NFZ8 388 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 EXTL1Q92935 676 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 OCSTAMPQ9BR26 566 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PLK3Q9H4B4 646 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 RNF150Q9ULK6 438 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A0J9YW62 118 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 FIGNL2A6NMB9 653 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 H0YIZ8 118 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PTGER4P35408 488 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 AWAT1Q58HT5 328 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 ASPHD2Q6ICH7 369 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 OR10S1Q8NGN2 331 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 NRIP2Q9BQI9 281 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 SLC25A31Q9H0C2 315 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 C19orf12Q9NSK7 152 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 MCTS1Q9ULC4 181 aaKnown RBP9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PCNX3Q9H6A9 2034 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A1W2PPE2 198 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 SIRPB1O00241 398 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 FABP9Q0Z7S8 132 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 C3AR1Q16581 482 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PABPC1L2AQ5JQF8 200 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 FAHD2BQ6P2I3 314 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 HIST2H3AQ71DI3 136 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 SLC26A1Q9H2B4 701 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 SHANK1Q9Y566 2161 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 OBSL1O75147 1896 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 AQP7P3A6NL99 342 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 TTLL8A6PVC2 850 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF732B4DXR9 585 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 IGFBP3P17936 291 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 ZXDAP98168 799 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 IL34Q6ZMJ4 242 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 WDR5BQ86VZ2 330 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms