RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CST2P09228 141 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 FAM157CP0CG43 387 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 RNF224P0DH78 156 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 CLDN17P56750 224 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 RAC1P63000 192 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 PJVKQ0ZLH3 352 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 AIMP2Q13155 320 aaKnown RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 MFAP5Q13361 173 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 EIF2S3LQ2VIR3 472 aaKnown RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 TMEM176BQ3YBM2 270 aaPredicted RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 TMEM42Q69YG0 159 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 DHRS7BQ6IAN0 325 aaPredicted RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 Q6ZS92 163 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 COMMD2Q86X83 199 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 C20orf196Q8IYI0 205 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 OR9K2Q8NGE7 335 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 OR1S2Q8NGQ3 325 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 CASTOR1Q8WTX7 329 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 PLEKHA2Q9HB19 425 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 ZNF160Q9HCG1 818 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 PCDHB16Q9NRJ7 776 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 LPAR3Q9UBY5 353 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 ZNF629Q9UEG4 869 aaPredicted RBP9.38□□□□□ -0.91
RTN3-201ENST00000338850 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
RTN3-201ENST00000338850 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A10PA6NDY2 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A18PA6NE21 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A16PA6NEW6 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A20PA6NIJ5 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A8PA6NJQ4 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A7PA6NKC0 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A22PA8MWA6 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A12PA8MX19 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A5PA8MXJ8 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A23PA8MXZ1 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 PRSS44E7EML9 344 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 M0R135 149 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 LGALS8O00214 317 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SNAPINO95295 136 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A15PP0C7V4 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A13PP0C7W8 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A14PP0C7W9 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM90A24PP0C7X0 464 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SULT1A2P50226 295 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 UCP3P55916 312 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SCRN3Q0VDG4 424 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SRSF7Q16629 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
RTN3-201ENST00000338850 LRRC37A5PQ49AS3 106 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 RIPPLY2Q5TAB7 128 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 Q6ZS49 121 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SHISA6Q6ZSJ9 500 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 LHFPL2Q6ZUX7 228 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 ZADH2Q8N4Q0 377 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
RTN3-201ENST00000338850 CSNK2A3Q8NEV1 391 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 OR51T1Q8NGJ9 327 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 OR10Z1Q8NGY1 313 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 ZNF799Q96GE5 643 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 SGCZQ96LD1 299 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 S100A13Q99584 98 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 ASF1BQ9NVP2 202 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
RTN3-201ENST00000338850 MYEF2Q9P2K5 600 aaKnown RBP9.37□□□□□ -0.91
RTN3-201ENST00000338850 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 FAM25EA8MYX2 175 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 NPIPA2E9PIF3 369 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 NPIPA3F8WFD2 350 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 CBR3O75828 277 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 JTBO76095 146 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 CST4P01036 141 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 IFNA2P01563 188 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 COX6A1P12074 109 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 ITGA3P26006 1051 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 BLVRBP30043 206 aaPredicted RBP9.36□□□□□ -0.91
RTN3-201ENST00000338850 SRD5A2P31213 254 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 CDAP32320 146 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 RBMXP38159 391 aaKnown RBP9.36□□□□□ -0.91
RTN3-201ENST00000338850 SSR4P51571 173 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 RAC3P60763 192 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 FAM3AP98173 230 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 HMGN3Q15651 99 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 UBE2V2Q15819 145 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 CHRFAM7AQ494W8 412 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 C4orf17Q53FE4 359 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms