RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 FOXI3A8MTJ6 420 aaPredicted RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 TSPAN4O14817 238 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 BET1O15155 118 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 XRCC2O43543 280 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 SYNGR1O43759 233 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 FARS2O95363 451 aaKnown RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 IL2RAP01589 272 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 IGHEP01854 428 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 CRHP06850 196 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 OR5H8P0DN80 308 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 RPA2P15927 270 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 WT1P19544 449 aaPredicted RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 ID4P47928 161 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 RAB1AP62820 205 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 NSUN5P2Q63ZY6 315 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 ATRAIDQ6UW56 229 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 ZDHHC22Q8N966 263 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 INO80EQ8NBZ0 244 aaPredicted RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 NTNG2Q96CW9 530 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 OCSTAMPQ9BR26 566 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 RNF126Q9BV68 326 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 ZC4H2Q9NQZ6 224 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 PCNX1Q96RV3 2341 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 TNRC6AQ8NDV7 1962 aaKnown RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 TPPPO94811 219 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 SYNGR4O95473 234 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 APOC3P02656 99 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 PSMB6P28072 239 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 OR2A2Q6IF42 318 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 MEX3BQ6ZN04 569 aaKnown RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 DBX2Q6ZNG2 339 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 MCEMP1Q8IX19 187 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 SUMF1Q8NBK3 374 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 MRPL24Q96A35 216 aaKnown RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 ADAT1Q9BUB4 502 aaKnown RBP7.64□□□□□ -1.19
SNCA-201ENST00000336904 OSGIN2Q9Y236 505 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 MUC6Q6W4X9 2439 aa7.64□□□□□ -1.19
SNCA-201ENST00000336904 A0A1B0GV50 99 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 HS3ST1O14792 307 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 AGPAT2O15120 278 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 TNFSF12O43508 249 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 SFT2D2O95562 160 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 FCGR2CP31995 323 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 PDZK1IP1Q13113 114 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 TRIP6Q15654 476 aaKnown RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 MPPED2Q15777 294 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 OR2T2Q6IF00 324 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 SPERTQ8NA61 448 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 APH1AQ96BI3 265 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 SPRR3Q9UBC9 169 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 ANXA10Q9UJ72 324 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 FZR1Q9UM11 496 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 MFSD2BA6NFX1 497 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 LYZL6O75951 148 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 CD8AP01732 235 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 CYC1P08574 325 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 FCGR3AP08637 254 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 ZNF133P52736 654 aaPredicted RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 PIGPP57054 158 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 SRSF3P84103 164 aaKnown RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 PRDX4Q13162 271 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 DAZAP2Q15038 168 aaPredicted RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 PLA2G2CQ5R387 149 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 MRPL21Q7Z2W9 205 aaKnown RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 SLC51BQ86UW2 128 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 PDZD9Q8IXQ8 264 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 OSR2Q8N2R0 312 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 ADAMTS17Q8TE56 1095 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 HPSE2Q8WWQ2 592 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 RDH5Q92781 318 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 BSCL2Q96G97 398 aaPredicted RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 DDA1Q9BW61 102 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 TMEM9BQ9NQ34 198 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 B4GALT7Q9UBV7 327 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 PFDN2Q9UHV9 154 aa7.63□□□□□ -1.19
SNCA-201ENST00000336904 C14orf166Q9Y224 244 aaKnown RBP7.63□□□□□ -1.19
SNCA-201ENST00000336904 ZNF732B4DXR9 585 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 FBXO24O75426 580 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 SP1P08047 785 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 OR5AC1P0C628 307 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 UBBP0CG47 229 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 RPS2P15880 293 aaKnown RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 ZNF708P17019 499 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 FPR2P25090 351 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CLN3Q13286 438 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CNN3Q15417 329 aaKnown RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 IAH1Q2TAA2 248 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 ALKBH6Q3KRA9 238 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 VAX1Q5SQQ9 334 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 HAGHLQ6PII5 290 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 TMEM185AQ8NFB2 350 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 OR1S2Q8NGQ3 325 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 OR6K3Q8NGY3 331 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 INTS12Q96CB8 462 aaKnown RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 TAS2R3Q9NYW6 316 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms