RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF684Q5T5D7 378 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 DCAF12Q5T6F0 453 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 LCN15Q6UWW0 184 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 CLRN3Q8NCR9 226 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 OR56B2PQ8NGI1 322 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 GPX7Q96SL4 187 aaPredicted RBP7.22□□□□□ -1.25
HPS4-201ENST00000336873 FOXB1Q99853 325 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 FAM24AA6NFZ4 105 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 PRR19A6NJB7 356 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 OR6C65A6NJZ3 312 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 LINC01387J3KSC0 135 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 BPNT1O95861 308 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 HOXC12P31275 282 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 EIF1P41567 113 aaKnown RBP7.21□□□□□ -1.25
HPS4-201ENST00000336873 CCL11P51671 97 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 TMEM50BP56557 158 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 TMEM33P57088 247 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 NHLH2Q02577 135 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 EDDM3AQ14507 147 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 ANKRD55Q3KP44 614 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 PABPC1L2AQ5JQF8 200 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 OR2T2Q6IF00 324 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 RABEPKQ7Z6M1 372 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 MKXQ8IYA7 352 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 UBALD2Q8IYN6 164 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 PSMF1Q92530 271 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 RRNAD1Q96FB5 475 aaKnown RBP7.21□□□□□ -1.25
HPS4-201ENST00000336873 DMRTA2Q96SC8 542 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 TLNRD1Q9H1K6 362 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 FBXL17Q9UF56 701 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 GTF3C1Q12789 2109 aa7.21□□□□□ -1.25
HPS4-201ENST00000336873 A0A0G2JMM0 328 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PPB8 328 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PRS3 328 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 KIR3DP1A8MWS1 328 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 TRAPPC2LH3BP13 241 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 ABCD4O14678 606 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 S100PP25815 95 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 KCNJ3P48549 501 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 MLF1P58340 268 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 SLC36A1Q7Z2H8 476 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 OR9K2Q8NGE7 335 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 SPSB2Q99619 263 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 NELFAQ9H3P2 528 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 FN3KRPQ9HA64 309 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 ZNF286AQ9HBT8 521 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 OBP2BQ9NPH6 170 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 TRAPPC2LQ9UL33 140 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 RFNGQ9Y644 331 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 AUP1Q9Y679 476 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 MBP02144 154 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 FABP6P51161 128 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 RAB5BP61020 215 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 GRB2P62993 217 aaKnown RBP7.21□□□□□ -1.26
HPS4-201ENST00000336873 PHYHD1Q5SRE7 291 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 ATP1A1-AS1Q5TC04 95 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 AADACL3Q5VUY0 350 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 GGNBP1Q5YKI7 109 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 ASPHD2Q6ICH7 369 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 RGS7BPQ6MZT1 257 aaPredicted RBP7.21□□□□□ -1.26
HPS4-201ENST00000336873 SLC23A3Q6PIS1 610 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.26
HPS4-201ENST00000336873 OR2M3Q8NG83 312 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 OR10S1Q8NGN2 331 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 DNTTIP1Q9H147 329 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 C5orf66Q9H5L9 145 aa7.21□□□□□ -1.26
HPS4-201ENST00000336873 TLN1Q9Y490 2541 aaKnown RBP7.21□□□□□ -1.26
HPS4-201ENST00000336873 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TMEM265A0A087WTH1 108 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TRAV14DV4A0A0A6YYC5 116 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TUBAL3A6NHL2 446 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ARGFXA6NJG6 315 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ATXN7O15265 892 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 DUS4LO95620 317 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 HPNP05981 417 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ZP3P21754 424 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 NPBWR2P48146 333 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 PPIAP62937 165 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 RPP30P78346 268 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 MIDNQ504T8 468 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 PUSL1Q8N0Z8 303 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 ZSCAN4Q8NAM6 433 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 FAM206AQ9NX38 181 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 KIF25Q9UIL4 384 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 C2orf16Q68DN1 1984 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 IGF2RP11717 2491 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 CFAP47Q6ZTR5 3102 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 DEFB108AA8MXU0 73 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ZNF732B4DXR9 585 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 E9PLN8 166 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TRAF3IP2O43734 574 aaPredicted RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 EIF1BO60739 113 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 DHRS3O75911 302 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 CLPSP04118 112 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 ECH1Q13011 328 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 CNN3Q15417 329 aaKnown RBP7.2□□□□□ -1.26
HPS4-201ENST00000336873 LY6G6FQ5SQ64 297 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 C5orf46Q6UWT4 87 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 FAM24BQ8N5W8 94 aa7.2□□□□□ -1.26
HPS4-201ENST00000336873 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms