RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 HTR2CP28335 458 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 GABRA2P47869 451 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 SNU13P55769 128 aaKnown RBP11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 RAB11BQ15907 218 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 HES5Q5TA89 166 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 STUMQ69YW2 141 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 LYPD2Q6UXB3 125 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 DCDC5Q6ZRR9 648 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR6M1Q8NGM8 313 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 RHOFQ9HBH0 211 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 HMG20AQ9NP66 347 aa11.77□□□□□ -0.53
APOBEC3B-202ENST00000335760 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 RFPL4AA6NLU0 287 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 RFPL4AL1F8VTS6 287 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC17A2O00624 439 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 TNFRSF13BO14836 293 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC22A1O15245 554 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 ADAM20O43506 726 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 NDUFA2O43678 99 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 GABARAPO95166 117 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 KNG1P01042 644 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 IGHV2-5P01817 119 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 RPS2P15880 293 aaKnown RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SERPINA2P20848 420 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL2RGP31785 369 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 BMXP51813 675 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 VBP1P61758 197 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 LMO4P61968 165 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 NCS1P62166 190 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 P2RY14Q15391 338 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 ELP2Q6IA86 826 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 FIP1L1Q6UN15 594 aaKnown RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 NR2C2APQ86WQ0 139 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 ANGPTL6Q8NI99 470 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 TBC1D15Q8TC07 691 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 CCL13Q99616 98 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 PATZ1Q9HBE1 687 aaKnown RBP11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 PCDHB16Q9NRJ7 776 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 IL36RNQ9UBH0 155 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 MIOXQ9UGB7 285 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 OR14J1Q9UGF5 321 aa11.76□□□□□ -0.53
APOBEC3B-202ENST00000335760 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 A0A0G2JK05 382 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 A0A1W2PP11 408 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 NKX6-3A6NJ46 265 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 HEXAP06865 529 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 UBBP0CG47 229 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUSP1P28562 367 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 PRDX2P32119 198 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 CEBPDP49716 269 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 CAV3P56539 151 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 FGF12P61328 243 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 GPR176Q14439 515 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 CTF1Q16619 201 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 DGUOKQ16854 277 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 FAM166AQ6J272 317 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 OSR2Q8N2R0 312 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 C1orf147Q96MC9 270 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 GLS2Q9UI32 602 aa11.75□□□□□ -0.53
APOBEC3B-202ENST00000335760 A0A1B0GW55 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 NOTOA8MTQ0 251 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 F5H0A9 414 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 CRTAPO75718 401 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 WNT2P09544 360 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L2P0CJ85 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L3P0CJ86 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L4P0CJ87 422 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L5P0CJ88 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L6P0CJ89 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L7P0CJ90 424 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 AMY2BP19961 511 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 RPS19P39019 145 aaKnown RBP11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 SERPINB10P48595 397 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 CLDN12P56749 244 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF146Q15072 292 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 NLRC3Q7RTR2 1065 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 SLC36A1Q7Z2H8 476 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
APOBEC3B-202ENST00000335760 Q8NFD4 153 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms