RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CDT1Q9H211 546 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TRAPPC1Q9Y5R8 145 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 A0A087WUU8 490 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 NPBWR2P48146 333 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 FLT3LGP49771 235 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SRSF7Q16629 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
TDP1-201ENST00000335725 ZNF260Q3ZCT1 412 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TMEM173Q86WV6 379 aaPredicted RBP7.58□□□□□ -1.2
TDP1-201ENST00000335725 LINC00346Q8IVM7 164 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TMEM256Q8N2U0 113 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 FGGYQ96C11 551 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TTC3P53804 2025 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 OR2T8A6NH00 312 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SLC33A1O00400 549 aaPredicted RBP7.58□□□□□ -1.2
TDP1-201ENST00000335725 ATXN7O15265 892 aaPredicted RBP7.58□□□□□ -1.2
TDP1-201ENST00000335725 MPPED1O15442 326 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 CD5LO43866 347 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 MSCO60682 206 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 CXCL8P10145 99 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 ZNF28P17035 718 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PSMB5P28074 263 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 FUT5Q11128 374 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TCEA2Q15560 299 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PMCHL1Q16048 86 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 PHF19Q5T6S3 580 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 SYT13Q7L8C5 426 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 C16orf82Q7Z2V1 217 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 OR51I2Q9H344 312 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 NUP98P52948 1817 aa7.58□□□□□ -1.2
TDP1-201ENST00000335725 TMEM265A0A087WTH1 108 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 A0A0G2JMM0 328 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 A0A1W2PPB8 328 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 HIDE1A8MVS5 230 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 KIR3DP1A8MWS1 328 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 MPZL1O95297 269 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 GPR75O95800 540 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 EDN1P05305 212 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 MRPL3P09001 348 aaKnown RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 PLAURQ03405 335 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 INO80CQ6PI98 192 aaPredicted RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 FIGLAQ6QHK4 219 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 PELI1Q96FA3 418 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 ZNF764Q96H86 408 aaPredicted RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 RASL10BQ96S79 203 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 CXCL16Q9H2A7 254 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 TRAPPC2LQ9UL33 140 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 NSG2Q9Y328 171 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 WDR90Q96KV7 1748 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 SIVA1O15304 175 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 RAD51DO75771 328 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 C1QL1O75973 258 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 SLC2A10O95528 541 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 FAM87AP0C7U9 286 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 CDKN1AP38936 164 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 KRTDAPP60985 99 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 PLCXD3Q63HM9 321 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 WDR25Q64LD2 544 aaPredicted RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 SLC38A5Q8WUX1 472 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 FAM46BQ96A09 425 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 DDIT4LQ96D03 193 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 P2RX4Q99571 388 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 HCAR1Q9BXC0 346 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 MRPL16Q9NX20 251 aaKnown RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 ZNF581Q9P0T4 197 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 NYNRINQ9P2P1 1898 aaKnown RBP7.57□□□□□ -1.2
TDP1-201ENST00000335725 IFNL4K9M1U5 179 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 SIRPB1O00241 398 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 DEDDO75618 318 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 IRF1P10914 325 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 P2RY2P41231 377 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 ARG2P78540 354 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 GAGE5Q13069 117 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 GAGE6Q13070 117 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 CAPSQ13938 189 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 Q499Y3 187 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 EEF1DP3Q658K8 133 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 PDCD1LG2Q9BQ51 273 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 PXMP2Q9NR77 195 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 MTCH1Q9NZJ7 389 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 AK3Q9UIJ7 227 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 PSG8Q9UQ74 426 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 ZNF780BQ9Y6R6 833 aa7.57□□□□□ -1.2
TDP1-201ENST00000335725 GAGE12HA6NDE8 117 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ADH5P11766 374 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF708P17019 499 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF43P17038 809 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 IL15RAQ13261 267 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 SPSB3Q6PJ21 355 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF627Q7L945 461 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 OR4D11Q8NGI4 311 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 C5orf30Q96GV9 206 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 ZNF681Q96N22 645 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 BANF2Q9H503 90 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 AHSPQ9NZD4 102 aa7.56□□□□□ -1.2
TDP1-201ENST00000335725 CKAP5Q14008 2032 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms