RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CST9Q5W186 159 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 FAAP20Q6NZ36 180 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 BCDIN3DQ7Z5W3 292 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CBLN2Q8IUK8 224 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MRPL37Q9BZE1 423 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 LIPGQ9Y5X9 500 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 NRXN3Q9Y4C0 1643 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TCRBV5S1A1TA0A578 114 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CA11O75493 328 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 S100A4P26447 101 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 COL9A3Q14050 684 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 GAMTQ14353 236 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 OR4S2Q8NH73 311 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 VN1R17PQ8TDU5 208 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TBX15Q96SF7 602 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZMAT3Q9HA38 289 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SLC7A10Q9NS82 523 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CLDN16Q9Y5I7 305 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 DDX60LQ5H9U9 1706 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SRSF10O75494 262 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SMIM13P0DJ93 91 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 IAPPP10997 89 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 OPRK1P41145 380 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 AESQ08117 197 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SCD5Q86SK9 330 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF511Q8NB15 262 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 COL16A1Q07092 1604 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 A0A0A6YYD5 115 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 HEPACAM2A8MVW5 462 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 EIF3GO75821 320 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ELNP15502 786 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CYB561P49447 251 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 KLF9Q13886 244 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 OR10V1Q8NGI7 309 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZG16BQ96DA0 208 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 VN1R1Q9GZP7 353 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 UBTD1Q9HAC8 227 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 HCRTO43612 131 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 Q6ZSR6 202 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MARCH3Q86UD3 253 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 WDFY1Q8IWB7 410 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PECRQ9BY49 303 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ISG20L2Q9H9L3 353 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TRAV34A0A0B4J273 112 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TMEM262E9PQX1 116 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PTGESO14684 152 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CRYABP02511 175 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 FOLR2P14207 255 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CD1CP29017 333 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 HMGA2P52926 109 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RPS16P62249 146 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 GNB1P62873 340 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 UBE2L3P68036 154 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SAPCD1Q5SSQ6 148 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF385CQ66K41 422 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 LIAT1Q6ZQX7 453 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TGIF2LXQ8IUE1 241 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RND1Q92730 232 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 HSD17B10Q99714 261 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CDCP1Q9H5V8 836 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 KCNK7Q9Y2U2 307 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MARF1Q9Y4F3 1742 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TRBV5-4A0A0C4DH59 114 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TNFRSF1AP19438 455 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 FCARP24071 287 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 TCTN3Q6NUS6 607 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 A4GNTQ9UNA3 340 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZC3H12DA2A288 527 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ALOX12BO75342 701 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PRSS1P07477 247 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MYOGP15173 224 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ACAA2P42765 397 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 IZUMO4Q1ZYL8 232 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 HFEQ30201 348 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 LRRC10Q5BKY1 277 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 METRNLQ641Q3 311 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 SH2D5Q6ZV89 423 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 INSM2Q96T92 566 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CACNG5Q9UF02 275 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PRNDQ9UKY0 176 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ANKRD31Q8N7Z5 1873 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 VENTXO95231 258 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 GUSBP08236 651 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PITX1P78337 314 aaPredicted RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 PRDX4Q13162 271 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RAB32Q13637 225 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RELTQ969Z4 430 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 OR5B21A6NL26 309 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 VDAC1P21796 283 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 LBX1P52954 281 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MEX3DQ86XN8 651 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ASB5Q8WWX0 329 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MRPL24Q96A35 216 aaKnown RBP4.94□□□□□ -1.62
PTPRB-202ENST00000334414 MS4A3Q96HJ5 214 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 GUCD1Q96NT3 240 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 RARRES2Q99969 163 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 CACNG4Q9UBN1 327 aa4.94□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF716A6NP11 495 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CEACAM3P40198 252 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms