RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 DERL3Q96Q80 235 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 CACNG5Q9UF02 275 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 CDX4O14627 284 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 PLP1P60201 277 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ECSCRQ19T08 205 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ACSM5Q6NUN0 579 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF576Q9H609 170 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 COX6CP09669 75 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 SIX1Q15475 284 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 IGFBP7Q16270 282 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 CALHM1Q8IU99 346 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM202A6NGA9 273 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 IFITM5A6NNB3 132 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 RPS4Y1P22090 263 aaKnown RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 STARD4Q96DR4 205 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 SMIM19Q96E16 107 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 UBE2ZQ9H832 354 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 HMGN4O00479 90 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 TNFAIP6P98066 277 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM38AQ9H6F2 299 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 OR6C3Q9NZP0 311 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 APCSP02743 223 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 JUNBP17275 347 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 FZD2Q14332 565 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 IZUMO4Q1ZYL8 232 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF880Q6PDB4 577 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 LRRC75AQ8NAA5 344 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF71Q9NQZ8 489 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-201ENST00000331920 TBC1D29Q9UFV1 150 aa14.7□□□□□ -0.06
PTCH1-201ENST00000331920 CHD5Q8TDI0 1954 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 VAMP5O95183 116 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 RAB1BQ9H0U4 201 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SIAH2O43255 324 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 OR13C6PQ8NH95 151 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 MRGPRDQ8TDS7 321 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 IGHV4-34P06331 123 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 PSG5Q15238 335 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 CEACAM16Q2WEN9 425 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SLC39A11Q8N1S5 342 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SPNS1Q9H2V7 528 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 FUT7Q11130 342 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SFRP2Q96HF1 295 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SLC26A1Q9H2B4 701 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 ATF1P18846 271 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 COL19A1Q14993 1142 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SLC25A30Q5SVS4 291 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 FAM71E1Q6IPT2 247 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 BAHD1Q8TBE0 780 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF552Q9H707 407 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-201ENST00000331920 HSF4Q9ULV5 492 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 GFYI3L273 518 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 KIR3DL2P43630 455 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 RPS4XP62701 263 aaKnown RBP14.69□□□□□ -0.06
PTCH1-201ENST00000331920 SLC35B3Q9H1N7 401 aa14.69□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM128Q5BJH2 165 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SPPL3Q8TCT6 385 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 KIR3DX1Q9H7L2 352 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 CD1EP15812 388 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 MORN1Q5T089 497 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 CYB5R1Q9UHQ9 305 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 ZFC3H1O60293 1989 aaKnown RBP14.68□□□□□ -0.06
PTCH1-201ENST00000331920 FZD9O00144 591 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 DSCR3O14972 297 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 PRSS2P07478 247 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 ZGLP1P0C6A0 271 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 VEGFBP49765 207 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SLIT3O75094 1523 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 RECKO95980 971 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 KIR2DS2P43631 304 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 GUCA2BQ16661 112 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 TRGV5A0A0B4J1U4 118 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SLC17A2O00624 439 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 CLDN20P56880 219 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SIGIRRQ6IA17 410 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 OR8I2Q8N0Y5 310 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 IGSF23A1L1A6 192 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 HAX1O00165 279 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 ARG1P05089 322 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 ASAH1Q13510 395 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 OR4P4Q8NGL7 312 aa14.68□□□□□ -0.06
PTCH1-201ENST00000331920 SLC25A35Q3KQZ1 300 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 NOXO1Q8NFA2 376 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 OR5AU1Q8NGC0 362 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 SSMEM1Q8WWF3 244 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 GABRG3Q99928 467 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM204Q9BSN7 226 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 MBNL1Q9NR56 388 aaKnown RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 C3orf85A0A1B0GTC6 90 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 SAXO2Q658L1 398 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 FAHD2BQ6P2I3 314 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM238LA0A1B0GVL6 79 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 A6NJY4 79 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 MPDU1O75352 247 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 SBK3P0C264 359 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 CSNK1DP48730 415 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 LGALSLQ3ZCW2 172 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 FAM27D1Q5T7N8 215 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 CA13Q8N1Q1 262 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms