RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 FOXRED1Q96CU9 486 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-202ENST00000331450 FAM192AQ9GZU8 254 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 RNF167Q9H6Y7 350 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 HMG20AQ9NP66 347 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 IL36RNQ9UBH0 155 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 MIOXQ9UGB7 285 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 GSTK1Q9Y2Q3 226 aa13.38□□□□□ -0.27
LRRC28-202ENST00000331450 MRPS28Q9Y2Q9 187 aaKnown RBP13.38□□□□□ -0.27
LRRC28-202ENST00000331450 AK6Q9Y3D8 172 aaKnown RBP13.38□□□□□ -0.27
LRRC28-202ENST00000331450 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 FAM157AC9JC47 383 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 SMAD7O15105 426 aaKnown RBP13.37□□□□□ -0.27
LRRC28-202ENST00000331450 SLC22A1O15245 554 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 FCN3O75636 299 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 CDRT1O95170 752 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 FOSL1P15407 271 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 MTNR1BP49286 362 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 FGF12P61328 243 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 SEC61A1P61619 476 aaKnown RBP13.37□□□□□ -0.27
LRRC28-202ENST00000331450 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 ZNF841Q6ZN19 808 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 SLC16A12Q6ZSM3 486 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 NR2C2APQ86WQ0 139 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 CD177Q8N6Q3 437 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 EMG1Q92979 244 aaKnown RBP13.37□□□□□ -0.27
LRRC28-202ENST00000331450 NEIL1Q96FI4 390 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-202ENST00000331450 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
LRRC28-202ENST00000331450 SEBOXQ9HB31 216 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-202ENST00000331450 A0A0G2JK05 382 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 A0A1B0GW55 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 A8MXK9 166 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 SLC17A2O00624 439 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 ADAM20O43506 726 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 AIREO43918 545 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 TFF1P04155 84 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 HEXAP06865 529 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 INHBBP09529 407 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L2P0CJ85 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L3P0CJ86 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L4P0CJ87 422 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L5P0CJ88 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L6P0CJ89 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L7P0CJ90 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 IGHV4-31P0DP07 118 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 CD99P14209 185 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 PRKACAP17612 351 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 OR10A3P58181 314 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 ZNF146Q15072 292 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DGUOKQ16854 277 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4L9Q6RFH8 374 aaPredicted RBP13.36□□□□□ -0.27
LRRC28-202ENST00000331450 OR51T1Q8NGJ9 327 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 OR6M1Q8NGM8 313 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 OR10K1Q8NGX5 313 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 SDSLQ96GA7 329 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 KCTD7Q96MP8 289 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 CCL13Q99616 98 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 DUX4Q9UBX2 424 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 PCDHB10Q9UN67 800 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 V9GY05 133 aa13.36□□□□□ -0.27
LRRC28-202ENST00000331450 ZNF469Q96JG9 3925 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-202ENST00000331450 DOCK11Q5JSL3 2073 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 RFPL4AA6NLU0 287 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 KIAA1324LA8MWY0 1029 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-202ENST00000331450 RFPL4AL1F8VTS6 287 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 PDCD5O14737 125 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 SIGLEC5O15389 551 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 GABARAPO95166 117 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 RAB3BP20337 219 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 HTR2CP28335 458 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
LRRC28-202ENST00000331450 CEBPDP49716 269 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-202ENST00000331450 BMXP51813 675 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 RSU1Q15404 277 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 AWAT2Q6E213 333 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 GLIPR1L1Q6UWM5 242 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 NLRC3Q7RTR2 1065 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 SLC36A1Q7Z2H8 476 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 TPRA1Q86W33 373 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 ANKRD13BQ86YJ7 626 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 FAM216BQ8N7L0 139 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 OR8B3Q8NGG8 313 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 OR8B2Q96RD0 313 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 METTL9Q9H1A3 318 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 SCOCQ9UIL1 159 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 ING4Q9UNL4 249 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 MAB21L2Q9Y586 359 aa13.35□□□□□ -0.27
LRRC28-202ENST00000331450 CREBBPQ92793 2442 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 A0A1W2PP11 408 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 TMPRSS2O15393 492 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-202ENST00000331450 CALCBP10092 127 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 SELLP14151 372 aa13.34□□□□□ -0.27
LRRC28-202ENST00000331450 PRDX2P32119 198 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms