RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 Q6ZRG5 221 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 OR11L1Q8NGX0 322 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 ADAMTS17Q8TE56 1095 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 PRRX2Q99811 253 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 NECAP2Q9NVZ3 263 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.45
ATP2C1-201ENST00000328560 SLC33A1O00400 549 aaPredicted RBP12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 ONECUT2O95948 504 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 ASCL1P50553 236 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 MLF1P58340 268 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 RAC3P60763 192 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 PSG4Q00888 419 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 ZNF616Q08AN1 781 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 FAM76BQ5HYJ3 339 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 ABHD3Q8WU67 409 aa12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.46
ATP2C1-201ENST00000328560 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 PRKACAP17612 351 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SUCLG1P53597 346 aaKnown RBP12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 ZNF92Q03936 586 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 C5orf24Q7Z6I8 188 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 ZFP82Q8N141 532 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 ESX1Q8N693 406 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 ERGIC1Q969X5 290 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SPSB1Q96BD6 273 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 BSCL2Q96G97 398 aaPredicted RBP12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 FOXB1Q99853 325 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 P4HTMQ9NXG6 502 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 IGKV1-12A0A0C4DH73 117 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 HSPB6O14558 160 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SYNGR3O43761 229 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 IGKV1D-12P01611 117 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 FCGR3AP08637 254 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SURF2Q15527 256 aaPredicted RBP12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 OR10AD1Q8NGE0 317 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 OR10D3Q8NH80 312 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 STRADBQ9C0K7 418 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 RNASEK-C17orf49H0YIS7 233 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 SNAPINO95295 136 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 IGHEP01854 428 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 CCL2P13500 99 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 GDF1P27539 372 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 HIST1H3AP68431 136 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 HIST2H3PS2Q5TEC6 136 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 RTL6Q6ICC9 239 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 HIST2H3AQ71DI3 136 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 C2CD4CQ8TF44 421 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 NRIP2Q9BQI9 281 aa12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 ZMAT5Q9UDW3 170 aaKnown RBP12.2□□□□□ -0.46
ATP2C1-201ENST00000328560 CRYM-AS1A6NIL9 109 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 NME2P1O60361 137 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 CRYGSP22914 178 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 PPT1P50897 306 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 IL15RAQ13261 267 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 OSR2Q8N2R0 312 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 INTS12Q96CB8 462 aaKnown RBP12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 NCOR1O75376 2440 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 A0A096LPE4 126 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 A0A1W2PPZ6 126 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 PHF1O43189 567 aaPredicted RBP12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 DMDP11532 3685 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 CST4P01036 141 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 PRH1P02810 166 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 OR8U9P0C7N5 309 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 LYL1P12980 280 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 STK11Q15831 433 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
ATP2C1-201ENST00000328560 DEDDO75618 318 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 CHATP28329 748 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 CAV2P51636 162 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 HERV-K104P61576 105 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 ETV3LQ6ZN32 361 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 SKA3Q8IX90 412 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 HSD17B11Q8NBQ5 300 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 NEK7Q8TDX7 302 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 AKR1E2Q96JD6 320 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 BCO1Q9HAY6 547 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 TIMM10BQ9Y5J6 103 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 COL6A3P12111 3177 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 TAAR5O14804 337 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 C1QL1O75973 258 aa12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 FLI1Q01543 452 aaPredicted RBP12.18□□□□□ -0.46
ATP2C1-201ENST00000328560 MALLQ13021 153 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms