RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 ATP6V0CP27449 155 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 GNMTQ14749 295 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 KHDC3LQ587J8 217 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 KLHDC7BQ96G42 594 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 TUBA4BQ9H853 241 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 UFSP2Q9NUQ7 469 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 PIAS3Q9Y6X2 628 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 CCDC187A0A096LP49 1063 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 H3BMH7 237 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 GPR137BO60478 399 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 GUCA1AP43080 201 aaPredicted RBP12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 PPA1Q15181 289 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 TMEM176BQ3YBM2 270 aaPredicted RBP12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 OR1N1Q8NGS0 311 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 LYZL4Q96KX0 146 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 SNX22Q96L94 193 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 OBP2AQ9NY56 170 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 PHOX2AO14813 284 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 IGHMP01871 453 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 SMAD4Q13485 552 aaKnown RBP12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 DOK3Q7L591 496 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 B3GAT1Q9P2W7 334 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 ABCA7Q8IZY2 2146 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 LIPT2A6NK58 231 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF43P17038 809 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 TUBG1P23258 451 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 PIGYQ3MUY2 71 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 CYB5R2Q6BCY4 276 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 LYPD6BQ8NI32 183 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 RBM24Q9BX46 236 aaKnown RBP12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 A0A087X0M5 115 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 A0A1B0GX30 115 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 F10P00742 488 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 CSNK1A1P48729 337 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF41P51814 821 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 CLDN17P56750 224 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 OR1D5P58170 312 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 EWSR1Q01844 656 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 ELOBQ15370 118 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC25A24Q6NUK1 477 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF587BE7ETH6 402 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 HSPB6O14558 160 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 GEMIN2O14893 280 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 SELLP14151 372 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 RAB11AP62491 216 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 PRAMEF20Q5VT98 475 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 TWSG1Q9GZX9 223 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 PPP4R1LQ9P1A2 415 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 GNG13Q9P2W3 67 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 HSF4Q9ULV5 492 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 NKX2-6A6NCS4 301 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 MSTNO14793 375 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 SCAF4O95104 1147 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 FOLR1P15328 257 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 RNF4P78317 190 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF880Q6PDB4 577 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 NECAP1Q8NC96 275 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 HAS2Q92819 552 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 NIPSNAP3BQ9BS92 247 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 WSB1Q9Y6I7 421 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 BLACEA4D250 179 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 MMP9P14780 707 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 DCAF7P61962 342 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 TMEM187Q14656 261 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 Q6ZS52 159 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 NOXO1Q8NFA2 376 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 METTL7AQ9H8H3 244 aa12.47□□□□□ -0.41
CHRNA3-201ENST00000326828 SDHAF3Q9NRP4 125 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms