RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
FN1-201ENST00000323926 TCRBV5S2A0A599 114 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 IGSF23A1L1A6 192 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 A6NIN4 97 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 NME2P1O60361 137 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 SLC25A4P12235 298 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 MPV17LQ2QL34 196 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 C9orf152Q5JTZ5 239 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 DLK2Q6UY11 383 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.6
FN1-201ENST00000323926 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 FYTTD1Q96QD9 318 aaKnown RBP11.27□□□□□ -0.6
FN1-201ENST00000323926 ANXA10Q9UJ72 324 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 TRDCB7Z8K6 153 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 TMPRSS11DO60235 418 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 OPN1LWP04000 364 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 HIST1H1DP16402 221 aaKnown RBP11.27□□□□□ -0.6
FN1-201ENST00000323926 ZNF385BQ569K4 471 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 OR5AS1Q8N127 324 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.6
FN1-201ENST00000323926 ONECUT1Q9UBC0 465 aa11.27□□□□□ -0.6
FN1-201ENST00000323926 TNRC6AQ8NDV7 1962 aaKnown RBP11.27□□□□□ -0.6
FN1-201ENST00000323926 SIRPB1O00241 398 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 GZMHP20718 246 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 TEX261Q6UWH6 196 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 ASB5Q8WWX0 329 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 U3KQ87 197 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 CLLU1Q5K131 121 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 ZNF343Q6P1L6 599 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 PDPNQ86YL7 162 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 RAB24Q969Q5 203 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 NAA60Q9H7X0 242 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 URGCP-MRPS24S4R325 110 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.61
FN1-201ENST00000323926 TSPAN7P41732 249 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 HMGA2P52926 109 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 CREBBPQ92793 2442 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 A0A0G2JMZ2 1700 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 LRRC37A2A6NM11 1700 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 B4GALT1P15291 398 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 CST9Q5W186 159 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 PRNDQ9UKY0 176 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 INSM1Q01101 510 aaPredicted RBP11.27□□□□□ -0.61
FN1-201ENST00000323926 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.61
FN1-201ENST00000323926 MAFAQ8NHW3 353 aaPredicted RBP11.27□□□□□ -0.61
FN1-201ENST00000323926 SIGLEC11Q96RL6 698 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 OCEL1Q9H607 264 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.61
FN1-201ENST00000323926 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
FN1-201ENST00000323926 TNCP24821 2201 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 PRR35P0CG20 571 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 PRSS42Q7Z5A4 293 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 POM121Q96HA1 1249 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 C20orf27Q9GZN8 174 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 CHRNA10Q9GZZ6 450 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 ISLRO14498 428 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 ICMTO60725 284 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 RHBDD2Q6NTF9 364 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 RAB33BQ9H082 229 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 SLC25A37Q9NYZ2 338 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 A6NJY4 79 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
FN1-201ENST00000323926 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
FN1-201ENST00000323926 EXTL1Q92935 676 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 GABRG3Q99928 467 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 H0Y8G0 127 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 MMP9P14780 707 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 CEACAM16Q2WEN9 425 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 KTI12Q96EK9 354 aaPredicted RBP11.26□□□□□ -0.61
FN1-201ENST00000323926 MPDU1O75352 247 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 PCSK6P29122 969 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 RIGQ13278 110 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 KCNAB1Q14722 419 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 COL19A1Q14993 1142 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 HLA-BQ31612 363 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 MARVELD1Q9BSK0 173 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 INHBBP09529 407 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 HLA-GP17693 338 aa11.26□□□□□ -0.61
FN1-201ENST00000323926 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
FN1-201ENST00000323926 MBNL1Q9NR56 388 aaKnown RBP11.26□□□□□ -0.61
FN1-201ENST00000323926 ELOBQ15370 118 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 SLC7A5P1Q8MH63 180 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 GPR119Q8TDV5 335 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 TOLLIPQ9H0E2 274 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 KLK10O43240 276 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 GALR1P47211 349 aa11.25□□□□□ -0.61
FN1-201ENST00000323926 RPL30P62888 115 aaKnown RBP11.25□□□□□ -0.61
FN1-201ENST00000323926 TMEM215Q68D42 235 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms