RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PRSS12P56730 875 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 PIGYQ3MUY2 71 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 PXDC1Q5TGL8 231 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 TMEM164Q5U3C3 297 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 BHLHE23Q8NDY6 225 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 OR51F2Q8NH61 342 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 MS4A7Q9GZW8 240 aaPredicted RBP19.35■□□□□ 0.69
PNKP-201ENST00000322344 SLC6A15Q9H2J7 730 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 TUBD1Q9UJT1 453 aa19.35■□□□□ 0.69
PNKP-201ENST00000322344 OPRM1P35372 400 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 CLDN18P56856 261 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 RBM11P57052 281 aaKnown RBP19.34■□□□□ 0.69
PNKP-201ENST00000322344 ARF1P84077 181 aaKnown RBP19.34■□□□□ 0.69
PNKP-201ENST00000322344 COX5BP10606 129 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 SMCO1Q147U7 214 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 TMEM211Q6ICI0 200 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 CPEB3Q8NE35 698 aaKnown RBP19.34■□□□□ 0.69
PNKP-201ENST00000322344 ARL11Q969Q4 196 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 GALNT14Q96FL9 552 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 SIGLEC12Q96PQ1 595 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 MICU1Q9BPX6 476 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 SLC7A10Q9NS82 523 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 FOXJ2Q9P0K8 574 aa19.34■□□□□ 0.69
PNKP-201ENST00000322344 ZNF587BE7ETH6 402 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 TSPAN4O14817 238 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 PIGPP57054 158 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 ABCA11PQ4W5N1 156 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 EIF5AL1Q6IS14 154 aaKnown RBP19.33■□□□□ 0.68
PNKP-201ENST00000322344 NAA60Q9H7X0 242 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 RNF122Q9H9V4 155 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 ZNF581Q9P0T4 197 aa19.33■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A10PA6NDY2 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A18PA6NE21 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A16PA6NEW6 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A20PA6NIJ5 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A8PA6NJQ4 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A7PA6NKC0 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A22PA8MWA6 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A12PA8MX19 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A5PA8MXJ8 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A23PA8MXZ1 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A15PP0C7V4 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A13PP0C7W8 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A14PP0C7W9 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FAM90A24PP0C7X0 464 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 ZNF708P17019 499 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 FUT3P21217 361 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 ZNF273Q14593 569 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 GGNBP1Q5YKI7 109 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 SLC22A25Q6T423 547 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 TMED6Q8WW62 240 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 LIME1Q9H400 295 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 C12orf4Q9NQ89 552 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 IGHV3-9P01782 118 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 UCP3P55916 312 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 SRYQ05066 204 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 OR1C1Q15619 314 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 CDCP2Q5VXM1 449 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 TMEM200AQ86VY9 491 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 Q8NFD4 153 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 SUCNR1Q9BXA5 334 aa19.32■□□□□ 0.68
PNKP-201ENST00000322344 ZNF724A8MTY0 619 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 HKR1P10072 659 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 GLP1RP43220 463 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 ZNF611Q8N823 705 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 TOMM40LQ969M1 308 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 LRRC46Q96FV0 321 aa19.31■□□□□ 0.68
PNKP-201ENST00000322344 DCAF10Q5QP82 559 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 MYO7BQ6PIF6 2116 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 SAXO1Q8IYX7 474 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 LRTM2Q8N967 370 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 ADAMTS17Q8TE56 1095 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 RTN4IP1Q8WWV3 396 aaPredicted RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 SAT2Q96F10 170 aaPredicted RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 NARS2Q96I59 477 aaKnown RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 SYT3Q9BQG1 590 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 REPIN1Q9BWE0 567 aaKnown RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 TTTY12Q9BZ98 90 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 ZC4H2Q9NQZ6 224 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 WDR87Q6ZQQ6 2873 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 LNP1A1A4G5 178 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 PRSS44E7EML9 344 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 TPD52L2O43399 206 aaKnown RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 DEDDO75618 318 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 CELA3AP09093 270 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 FAM157CP0CG43 387 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 FCGR2CP31995 323 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 TMEM187Q14656 261 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 TUSC5Q8IXB3 177 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 NAXEQ8NCW5 288 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 DYRK2Q92630 601 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 MRPL24Q96A35 216 aaKnown RBP19.3■□□□□ 0.68
PNKP-201ENST00000322344 MOB3AQ96BX8 217 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 LOXL4Q96JB6 756 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 MMP26Q9NRE1 261 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 STARD10Q9Y365 291 aa19.3■□□□□ 0.68
PNKP-201ENST00000322344 PQLC2LA1A4F0 135 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 K7EPK0 472 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 ITGA3P26006 1051 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 RPL12P30050 165 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms