RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DMXL1Q9Y485 3027 aa13.58□□□□□ -0.23
SHROOM1-201ENST00000319854 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 CER1O95813 267 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 SRYQ05066 204 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 SLC25A53Q5H9E4 307 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 C1orf100Q5SVJ3 147 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 C1QL2Q7Z5L3 287 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 TERB2Q8NHR7 220 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 ULBP2Q9BZM5 246 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 ARRDC1-AS1Q9H2J1 176 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 NXT1Q9UKK6 140 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 RAB22AQ9UL26 194 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 DOCK10Q96BY6 2186 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 A0A0A6YYH2 397 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 A6NJ64 397 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 SFT2D2O95562 160 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 SNCAP37840 140 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 IL15RAQ13261 267 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 WIPI1Q5MNZ9 446 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 LYPD6BQ8NI32 183 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 CDC6Q99741 560 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 PIGQQ9BRB3 760 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 WDR54Q9H977 334 aa13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-201ENST00000319854 CD63P08962 238 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF17P17021 662 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 NDUFB7P17568 137 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 SERPINA2P20848 420 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF124Q15973 351 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 GUK1Q16774 197 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 POC1AQ8NBT0 407 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 BSCL2Q96G97 398 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 RTBDNQ9BSG5 229 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ST6GALNAC5Q9BVH7 336 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 H7C1Q1 480 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 NDUFA6P56556 154 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ARFRP1Q13795 201 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 KIAA0141Q14154 515 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 EXT1Q16394 746 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 OR9K2Q8NGE7 335 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 RNF138Q8WVD3 245 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 MALSU1Q96EH3 234 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 CHST5Q9GZS9 411 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 PNRC2Q9NPJ4 139 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 FBXL17Q9UF56 701 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 PADI1Q9ULC6 663 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 ZFHX4Q86UP3 3567 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 IGLV3-32A0A0A0MS00 114 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 A0A1B0GV50 99 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 CXCL13O43927 109 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 C1QL1O75973 258 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 SFTPBP07988 381 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 GLRA1P23415 457 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 THBS4P35443 961 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 RAB5CP51148 216 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 Q0VFX4 171 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 SPINK14Q6IE38 97 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 TIPARPQ7Z3E1 657 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 OR5AS1Q8N127 324 aa13.57□□□□□ -0.24
SHROOM1-201ENST00000319854 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 A0A0A6YYD4 124 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 LOC390937A0A1W2PQ73 354 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 STMND1H3BQB6 276 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ETV2O00321 342 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 TSPAN15O95858 294 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 P04436 131 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 B4GALT1P15291 398 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF708P17019 499 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 MSR1P21757 451 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 QRFPP83859 136 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ZFP36L1Q07352 338 aaKnown RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 CD300LFQ8TDQ1 290 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF700Q9H0M5 742 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 UFSP2Q9NUQ7 469 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 MMP24Q9Y5R2 645 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 NPIPB13A6NJU9 1138 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 NPIPB4C9JG80 1138 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 SDCBPO00560 298 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 NTF4P34130 210 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 DSCR4P56555 118 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ACTBL2Q562R1 376 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 GFI1BQ5VTD9 330 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 ARHGAP5-AS1Q96IT6 56 aa13.56□□□□□ -0.24
SHROOM1-201ENST00000319854 LOC102723996A0A087X1L8 192 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms