RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 A6NLC8 198 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 H3BMH7 237 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 TNFSF12O43508 249 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 NDUFA2O43678 99 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 ZXDAP98168 799 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 SHBQ15464 509 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 SOHLH1Q5JUK2 328 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 ABHD17BQ5VST6 288 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 PLXDC2Q6UX71 529 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 FBXL14Q8N1E6 418 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 RSRP1Q9BUV0 290 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 OSGIN2Q9Y236 505 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 HDGFL3Q9Y3E1 203 aa9.21□□□□□ -0.94
COL3A1-202ENST00000317840 TRBV6-7A0A0A0MS04 114 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 hCG_1809904A0A1W2PP81 198 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 A0A1W2PR64 198 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 A0A1W2PRV1 198 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ADAM10O14672 748 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 GDF1P27539 372 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 RPS10P46783 165 aaKnown RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 SULT1A2P50226 295 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 SLC25A47Q6Q0C1 308 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 KMT5CQ86Y97 462 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 MAML2Q8IZL2 1156 aaPredicted RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 AKR7LQ8NHP1 331 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 SAP25Q8TEE9 199 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ALKBH3Q96Q83 286 aaPredicted RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ESRP2Q9H6T0 727 aaKnown RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 PLEKHA2Q9HB19 425 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 RBM7Q9Y580 266 aaKnown RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 RBP2P50120 134 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 SSR4P51571 173 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 MALLQ13021 153 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 CNN3Q15417 329 aaKnown RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 PLCXD3Q63HM9 321 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 WDR74Q6RFH5 385 aaPredicted RBP9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF695Q8IW36 515 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 GPR137CQ8N3F9 429 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 SUMF2Q8NBJ7 301 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 POC1BQ8TC44 478 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 HAS2Q92819 552 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ERGIC1Q969X5 290 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 MAGT1Q9H0U3 335 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF286AQ9HBT8 521 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 TMEM100Q9NV29 134 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 URGCP-MRPS24S4R325 110 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 LAMA1P25391 3075 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 A0A1W2PPH5 198 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 NPIPB13A6NJU9 1138 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 NPIPB4C9JG80 1138 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 NQO2P16083 231 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ANOS1P23352 680 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 FABP9Q0Z7S8 132 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 LGI3Q8N145 548 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 ST3GAL6Q9Y274 331 aa9.2□□□□□ -0.94
COL3A1-202ENST00000317840 MYO15AQ9UKN7 3530 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 A0A1W2PNV4 684 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 IFNA4P05014 189 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 RD3LP0DJH9 198 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 B4GALT1P15291 398 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 ECI1P42126 302 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 SURF2Q15527 256 aaPredicted RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 TMEM268Q5VZI3 342 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 LYPD6Q86Y78 171 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 SKA3Q8IX90 412 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 SLC39A7Q92504 469 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 NUDT16L1Q9BRJ7 211 aaKnown RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 CHST5Q9GZS9 411 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 AK3Q9UIJ7 227 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 CACNA1DQ01668 2161 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 M0R296 226 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 TNFSF11O14788 317 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 HSPA12AO43301 675 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 CTSDP07339 412 aaPredicted RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 NHLH2Q02577 135 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 HMGN3Q15651 99 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 CCDC71LQ8N9Z2 235 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 THOC3Q96J01 351 aaKnown RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 SMIM8Q96KF7 97 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 IP6K3Q96PC2 410 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 CHRNA10Q9GZZ6 450 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 PARP11Q9NR21 331 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 GPR27Q9NS67 375 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 ABI3Q9P2A4 366 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 FBLN5Q9UBX5 448 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 MEX3AA1L020 520 aaKnown RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 AQP7P3A6NL99 342 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 FAM166BA8MTA8 275 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 GEMIN2O14893 280 aaKnown RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 EIF1BO60739 113 aaKnown RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF17P17021 662 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 DUSP1P28562 367 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF774Q6NX45 483 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 TCTEX1D2Q8WW35 142 aa9.19□□□□□ -0.94
COL3A1-202ENST00000317840 C1orf147Q96MC9 270 aaPredicted RBP9.19□□□□□ -0.94
COL3A1-202ENST00000317840 OR51B6Q9H340 312 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms