RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 HNF4GQ14541 408 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 OR2T2Q6IF00 324 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 POC1BQ8TC44 478 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 ANXA10Q9UJ72 324 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 CHCHD2Q9Y6H1 151 aaPredicted RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 WDR1O75083 606 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 CRHP06850 196 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 ZNF766Q5HY98 468 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 NKX6-2Q9C056 277 aaPredicted RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 ZNF629Q9UEG4 869 aaPredicted RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 CFDP00746 253 aaPredicted RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 IFNA1P01562 189 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 LIMK1P53667 647 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 RNPS1Q15287 305 aaKnown RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 SUMF2Q8NBJ7 301 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 GPR87Q9BY21 358 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 MAGT1Q9H0U3 335 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
PCDHB9-201ENST00000316105 H7C1Q1 480 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 CD80P33681 288 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 H2BFSP57053 126 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 SHEQ5VZ18 495 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 Q6ZRG5 221 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 HDHD3Q9BSH5 251 aaPredicted RBP11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 GNG12Q9UBI6 72 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 C2orf16Q68DN1 1984 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 LINC00862A6NCI5 91 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 CATR1Q13166 79 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 FHL1Q13642 323 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 EDDM3AQ14507 147 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 TSPO2Q5TGU0 170 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 TIMP4Q99727 224 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 TSTD3H0UI37 97 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 NME2P1O60361 137 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 HPNP05981 417 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 TMEM88Q6PEY1 159 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 OR5M9Q8NGP3 310 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 SUCNR1Q9BXA5 334 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
PCDHB9-201ENST00000316105 SHISA7A6NL88 538 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 SSSCA1O60232 199 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 ZP1P60852 638 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 MSMO1Q15800 293 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 OR2M7Q8NG81 312 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 OR14K1Q8NGZ2 314 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 ERVK-16P61578 105 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 GNG3P63215 75 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 TMPRSS7Q7RTY8 843 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 LHFPL5Q8TAF8 219 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 UBALD1Q8TB05 177 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 AQP3Q92482 292 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 PRRX2Q99811 253 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 ZP3P21754 424 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 TUBG1P23258 451 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 CA6P23280 308 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 DYRK2Q92630 601 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 SLC26A1Q9H2B4 701 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 PLEKHF2Q9H8W4 249 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 IFNA17P01571 189 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 FABP6P51161 128 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 GFOD1Q9NXC2 390 aa11.74□□□□□ -0.53
PCDHB9-201ENST00000316105 C21orf140B9A014 251 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 GLAP06280 429 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 PSG4Q00888 419 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 PRSS54Q6PEW0 395 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 TMEM182Q6ZP80 229 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 OR2G3Q8NGZ4 309 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 CLDN1O95832 211 aa11.73□□□□□ -0.53
PCDHB9-201ENST00000316105 CHATP28329 748 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms