RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ARF1P84077 181 aaKnown RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SVBPQ8N300 66 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM229BQ8NBD8 167 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 CPNE4Q96A23 557 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SGK3Q96BR1 496 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 PHB2Q99623 299 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 IFT22Q9H7X7 185 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 GPR35Q9HC97 309 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM38BQ9NVV0 291 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 DLL3Q9NYJ7 618 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SVEP1Q4LDE5 3571 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 LOC102725191A0A1B0GVB3 256 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 A0A1W2PPE3 182 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF587BE7ETH6 402 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 RAB27BO00194 218 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SLC33A1O00400 549 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 LRP3O75074 770 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 CRTAPO75718 401 aaPredicted RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 EIF3GO75821 320 aaKnown RBP eCLIP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 FCGR2AP12318 317 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SERPINA2P20848 420 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 FKBP2P26885 142 aaKnown RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 PPT1P50897 306 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 SPATA46Q5T0L3 261 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 DEGS2Q6QHC5 323 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 EIF4E3Q8N5X7 224 aaKnown RBP6.61□□□□□ -1.35
TRIM55-202ENST00000315962 ADPRHL1Q8NDY3 354 aa6.61□□□□□ -1.35
TRIM55-202ENST00000315962 TRAV20A0A0B4J274 112 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MEX3AA1L020 520 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 C5orf49A4QMS7 147 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 NME2P1O60361 137 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MED6O75586 246 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR2F2O95006 317 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 NGFP01138 241 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CD8AP01732 235 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF708P17019 499 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 PTGFRP43088 359 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ASCL1P50553 236 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 TNFSF10P50591 281 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CLN3Q13286 438 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR2F1Q13607 317 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RAB32Q13637 225 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MPPED2Q15777 294 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 FAM27BQ5VT28 67 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RPL7L1Q6DKI1 246 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR2A2Q6IF42 318 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 FAM166AQ6J272 317 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MCEMP1Q8IX19 187 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF100Q8IYN0 542 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 NTNG2Q96CW9 530 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 C14orf79Q96F83 325 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 PIK3IP1Q96FE7 263 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR10C1Q96KK4 312 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SLC25A21Q9BQT8 299 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 PIGMQ9H3S5 423 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 METTL8Q9H825 291 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 POLEQ07864 2286 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 A0A1B0GW55 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SSX5O60225 188 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 C1QL1O75973 258 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SYNGR4O95473 234 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CRHP06850 196 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L2P0CJ85 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L3P0CJ86 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L4P0CJ87 422 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L5P0CJ88 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L6P0CJ89 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4L7P0CJ90 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 PSMB6P28072 239 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 LPAR6P43657 344 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 FHITP49789 147 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 F2RL1P55085 397 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF92Q03936 586 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SWI5Q1ZZU3 235 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MICBQ29980 383 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 BAP18Q8IXM2 172 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR5AS1Q8N127 324 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CNEP1R1Q8N9A8 125 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MDS2Q8NDY4 140 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 C15orf40Q8WUR7 153 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 AKR1E2Q96JD6 320 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CLCC1Q96S66 551 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RNF126Q9BV68 326 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 DUX4Q9UBX2 424 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CADP27708 2225 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ASH1LQ9NR48 2969 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 TRGV5A0A0B4J1U4 118 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 TXNL1O43396 289 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CYTIPO60759 359 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RAD51DO75771 328 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ACAA1P09110 424 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SFTA3P0C7M3 94 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 GLRA1P23415 457 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MRPS34P82930 218 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 KISS1Q15726 138 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms