RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CASQ2O14958 399 aaPredicted RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 FADS2O95864 444 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 CCL3L1P16619 93 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 GTF2A1P52655 376 aaPredicted RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 COL10A1Q03692 680 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 RCN1Q15293 331 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 TAF9Q16594 264 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF529Q6P280 563 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 C17orf107Q6ZR85 190 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF485Q8NCK3 441 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SPSB1Q96BD6 273 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 PDCD1LG2Q9BQ51 273 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ADI1Q9BV57 179 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF747Q9BV97 191 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 FAM234AQ9H0X4 552 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 METTL8Q9H825 291 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 C1RLQ9NZP8 487 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 RPL36Q9Y3U8 105 aaKnown RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 POMT1Q9Y6A1 747 aa11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 SIRT4Q9Y6E7 314 aaPredicted RBP11.92□□□□□ -0.5
PPP1CA-201ENST00000312989 A0A1W2PQ09 198 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 ANKRD65E5RJM6 399 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 NPFFO15130 113 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 LALBAP00709 142 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 MDKP21741 143 aaPredicted RBP11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 SAA4P35542 130 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 RBP2P50120 134 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 ETV1P50549 477 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 UBE2E1P51965 193 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 ZP1P60852 638 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 FOXL1Q12952 345 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 OGFRL1Q5TC84 451 aaPredicted RBP11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 FIP1L1Q6UN15 594 aaKnown RBP11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 MKXQ8IYA7 352 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 CMTM4Q8IZR5 234 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 PARP16Q8N5Y8 322 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 PACRGLQ8N7B6 248 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 OR4M1Q8NGD0 313 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 OR52N4Q8NGI2 321 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 FBLIM1Q8WUP2 373 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 SSMEM1Q8WWF3 244 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
PPP1CA-201ENST00000312989 TRBV2A0A0J9YWF9 115 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 A0A1W2PRD5 423 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 A0A1W2PRF3 423 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 A0A1W2PRM7 423 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 HAX1O00165 279 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 SLC1A7O00341 560 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 SPRY1O43609 319 aaPredicted RBP11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 PSPNO60542 156 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 BCL3P20749 454 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 RPL31P62899 125 aaKnown RBP11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 PDZK1IP1Q13113 114 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 ZNF146Q15072 292 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 OR13C9Q8NGT0 318 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 STMN2Q93045 179 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 SPACA5Q96QH8 159 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 TNFRSF19Q9NS68 423 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 MMP24Q9Y5R2 645 aa11.9□□□□□ -0.5
PPP1CA-201ENST00000312989 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 TMEM212A6NML5 194 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 KDM4BO94953 1096 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 INMTO95050 263 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 ALX3O95076 343 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 SERPINA3P01011 423 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 GNAO1P09471 354 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 OMGP23515 440 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 MTCP1P56278 107 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 LDLRAD2Q5SZI1 272 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 LHFPL2Q6ZUX7 228 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 OR13C3Q8NGS6 347 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 RFT1Q96AA3 541 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 CLEC2DQ9UHP7 191 aa11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 DIMT1Q9UNQ2 313 aaKnown RBP11.89□□□□□ -0.51
PPP1CA-201ENST00000312989 GPR137BO60478 399 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 NDUFA7O95182 113 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 HAND1O96004 215 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 CHRM2P08172 466 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 CALCBP10092 127 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 ZNF20P17024 532 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 PRKACBP22694 351 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 DUSP1P28562 367 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 POU3F4P49335 361 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 CAPZA1P52907 286 aa11.88□□□□□ -0.51
PPP1CA-201ENST00000312989 ATP1B3P54709 279 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms