RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 CCDC157Q569K6 752 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 PABPC1L2AQ5JQF8 200 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 TMEM268Q5VZI3 342 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 IL34Q6ZMJ4 242 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 CLRN3Q8NCR9 226 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 TOMM40LQ969M1 308 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 ZNF629Q9UEG4 869 aaPredicted RBP13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 LOXL2Q9Y4K0 774 aa13.17□□□□□ -0.3
SPIRE1-201ENST00000309836 TAAR5O14804 337 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 TCN2P20062 427 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 RPL12P30050 165 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PCBD1P61457 104 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PJVKQ0ZLH3 352 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 FOXO1Q12778 655 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PLCXD3Q63HM9 321 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 LDLRAD3Q86YD5 345 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 WNT2BQ93097 391 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 RGCCQ9H4X1 137 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 NAA60Q9H7X0 242 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 AMDHD2Q9Y303 409 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 MRPS18CQ9Y3D5 142 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SERPINA7P05543 415 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 FCGR2CP31995 323 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 LPAR6P43657 344 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 FUT6P51993 359 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PDCD1Q15116 288 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SP6Q3SY56 376 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SLC23A3Q6PIS1 610 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PSMF1Q92530 271 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PIGCQ92535 297 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 SAT2Q96F10 170 aaPredicted RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 PRRX2Q99811 253 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 FBXL17Q9UF56 701 aa13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
SPIRE1-201ENST00000309836 ZNF816-ZNF321PA0A0X1KG74 233 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 PDCD6O75340 191 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 IFNA21P01568 189 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 NME2P22392 152 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 FXYD4P59646 89 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 SVBPQ8N300 66 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 SPSB4Q96A44 273 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 BSCL2Q96G97 398 aaPredicted RBP13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 C1QTNF5Q9BXJ0 243 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 SLC7A11Q9UPY5 501 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 ST3GAL6Q9Y274 331 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 FAM96BQ9Y3D0 163 aa13.15□□□□□ -0.3
SPIRE1-201ENST00000309836 F8W036 122 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 K7EPK0 472 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 IGHV3-9P01782 118 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 ACP1P24666 158 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 CYB561P49447 251 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 RBM11P57052 281 aaKnown RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 EIF5AP63241 154 aaKnown RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 BLOC1S1P78537 153 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 SSPNQ14714 243 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 PHLDA2Q53GA4 152 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 FAM71E2Q8N5Q1 922 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 GALNT14Q96FL9 552 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 TLNRD1Q9H1K6 362 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 HRH4Q9H3N8 390 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 XRCC2O43543 280 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 MED6O75586 246 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 SCGB1D2O95969 90 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 F12P00748 615 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 CST4P01036 141 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 MBPP02686 304 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 GAPDHP04406 335 aaKnown RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 MUC1P15941 1255 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 SULT1A2P50226 295 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 ABCA11PQ4W5N1 156 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 CALHM1Q8IU99 346 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 BATF2Q8N1L9 274 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 RTN4IP1Q8WWV3 396 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 AIFM2Q9BRQ8 373 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
SPIRE1-201ENST00000309836 ZNF286AQ9HBT8 521 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms