RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ARR3P36575 388 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 PRKXP51817 358 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 DHODHQ02127 395 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 ENDOGQ14249 297 aaKnown RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 GSG1Q2KHT4 349 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 ZIK1Q3SY52 487 aaPredicted RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 SLC36A2Q495M3 483 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 AKIRIN2Q53H80 203 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 NCMAPQ5T1S8 102 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 LINC01590Q5TEZ4 76 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 HIST2H2BCQ6DN03 193 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 SLC16A14Q7RTX9 510 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 SLC16A9Q7RTY1 509 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 SLC26A10Q8NG04 563 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 OR4A16Q8NH70 328 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 FGFBP3Q8TAT2 258 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 ZNRF4Q8WWF5 429 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 TRUB1Q8WWH5 349 aaKnown RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 TMEM80Q96HE8 168 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 MBOAT4Q96T53 435 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 PCGF1Q9BSM1 259 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 HCAR1Q9BXC0 346 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 ZNF430Q9H8G1 570 aaPredicted RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 HINT3Q9NQE9 182 aaKnown RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 METRNQ9UJH8 293 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 NDRG4Q9ULP0 352 aaKnown RBP7.08□□□□□ -1.28
CHD6-201ENST00000309279 MOKQ9UQ07 419 aa7.08□□□□□ -1.28
CHD6-201ENST00000309279 SPG11Q96JI7 2443 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 CSMD1Q96PZ7 3565 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 TEX13DA0A0J9YY54 714 aaPredicted RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 FAM183AA6NL82 134 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 PRKYO43930 277 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 MPZL1O95297 269 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 CD1AP06126 327 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 GRPP07492 148 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 LYL1P12980 280 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ZNF14P17017 642 aaPredicted RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 SLC2A5P22732 501 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 APEX1P27695 318 aaKnown RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 DCKP27707 260 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 GGT2P36268 569 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ZP1P60852 638 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 PIGFQ07326 219 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 DBPQ10586 325 aaPredicted RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 FHL3Q13643 280 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 CXorf66Q5JRM2 361 aaPredicted RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 SLC25A30Q5SVS4 291 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 UGT2A3Q6UWM9 527 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 MDP1Q86V88 176 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ZNF584Q8IVC4 421 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 LRRC18Q8N456 261 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 TCEANCQ8N8B7 351 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 OR9Q1Q8NGQ5 310 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 OR13C5Q8NGS8 318 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 TMEM163Q8TC26 289 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ABHD5Q8WTS1 349 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 C11orf40Q8WZ69 217 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 R3HDM4Q96D70 268 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 PITX2Q99697 317 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 TMEM204Q9BSN7 226 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 C1QTNF6Q9BXI9 259 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 RERGLQ9H628 205 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 ESRP2Q9H6T0 727 aaKnown RBP7.07□□□□□ -1.28
CHD6-201ENST00000309279 NOX3Q9HBY0 568 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 MLXQ9UH92 298 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 AKAP6Q13023 2319 aa7.07□□□□□ -1.28
CHD6-201ENST00000309279 IGHV1-18A0A0C4DH31 117 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 LOC100130705A0A1B0GUX0 176 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SMCO3A2RU48 225 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 GOSR2O14653 212 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 NBR2O15453 112 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 ATP6V1G2O95670 118 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 GPANK1O95872 356 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 GYPBP06028 91 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 CECR9P0C854 216 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 PATE4P0C8F1 98 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 CD79AP11912 226 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 ZNF32P17041 273 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 ANXA7P20073 488 aaKnown RBP7.06□□□□□ -1.28
CHD6-201ENST00000309279 RAB3AP20336 220 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SSTR2P30874 369 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 FMO3P31513 532 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 PYCR1P32322 319 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 NPBWR2P48146 333 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 EIF2B2P49770 351 aaKnown RBP7.06□□□□□ -1.28
CHD6-201ENST00000309279 ZNF83P51522 516 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 PCBD1P61457 104 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 BLOC1S1P78537 153 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SSBP2P81877 361 aaPredicted RBP7.06□□□□□ -1.28
CHD6-201ENST00000309279 TEKQ02763 1124 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 BSPH1Q075Z2 132 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 TATDN3Q17R31 274 aa7.06□□□□□ -1.28
CHD6-201ENST00000309279 SLC35D3Q5M8T2 416 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms