RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR11H7Q8NGC8 314 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 TMEM68Q96MH6 324 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 SLC26A1Q9H2B4 701 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 LHFPL6Q9Y693 200 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 RTTNQ86VV8 2226 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 A0A0U1RQV5 110 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 hCG_1809904A0A1W2PP81 198 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 A0A1W2PPE2 198 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 A0A1W2PR64 198 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 A0A1W2PRV1 198 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 GEMIN2O14893 280 aaKnown RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 SPRY3O43610 288 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 NGFP01138 241 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 ISG15P05161 165 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 LIMK1P53667 647 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 MOB1BQ7L9L4 216 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR5M8Q8NGP6 311 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 MAP6Q96JE9 813 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 CACNA1HO95180 2353 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 C7orf66A4D0T2 115 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 NPIPB13A6NJU9 1138 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 NPIPB4C9JG80 1138 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 CALCRP30988 508 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 HLXQ14774 488 aaPredicted RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 CLLU1Q5K131 121 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 SLC35G3Q8N808 338 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 PRRX2Q99811 253 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 ERRFI1Q9UJM3 462 aaPredicted RBP10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 FZR1Q9UM11 496 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 MED12Q93074 2177 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 RAB27BO00194 218 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 MPC2O95563 127 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 ADRB1P08588 477 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 UBE2KP61086 200 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 FBXW9Q5XUX1 488 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 Q6ZRG5 221 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 LFNGQ8NES3 379 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 LNP1A1A4G5 178 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 PSG4Q00888 419 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 HIKESHIQ53FT3 197 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 CST9LP1Q5W188 147 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 H3F3CQ6NXT2 135 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 SSX9Q7RTT3 188 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF75AQ96N20 296 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 SLC7A10Q9NS82 523 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 TAAR3PQ9P1P4 343 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 TMED3Q9Y3Q3 217 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 NME2P1O60361 137 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 IL3RAP26951 378 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF239Q16600 458 aaKnown RBP10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 PPP1R32Q7Z5V6 425 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNRF4Q8WWF5 429 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 NDRG3Q9UGV2 375 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 IGLV3-12A0A075B6K2 115 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 HMSDA8MTL9 139 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 NUDT19A8MXV4 375 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 IGHMP01871 453 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 FTH1P19P0C7X4 201 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 SURF2Q15527 256 aaPredicted RBP10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 MICBQ29980 383 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 WDSUB1Q8N9V3 476 aa10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF629Q9UEG4 869 aaPredicted RBP10.01□□□□□ -0.81
PCDHGC3-201ENST00000308177 APOA2P02652 100 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 SPINK2P20155 84 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 CD80P33681 288 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 TOR2AQ5JU69 321 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 FDX2Q6P4F2 183 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 NAA60Q9H7X0 242 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 MYLKQ15746 1914 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 ANAPC1Q9H1A4 1944 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 ADAP1O75689 374 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 IAPPP10997 89 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 PDZK1IP1Q13113 114 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 RAB32Q13637 225 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 TGIF1Q15583 401 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 CISD2Q8N5K1 135 aaKnown RBP10□□□□□ -0.81
PCDHGC3-201ENST00000308177 S1PR3Q99500 378 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 OPN4Q9UHM6 478 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 DOCK8Q8NF50 2099 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 PI4KAP42356 2102 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 LMX1BO60663 402 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR8U8P0C7N1 319 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 CFHR1Q03591 330 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 COL19A1Q14993 1142 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 C1orf100Q5SVJ3 147 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF485Q8NCK3 441 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 FN3KRPQ9HA64 309 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 BIN3Q9NQY0 253 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 IL17BQ9UHF5 180 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 AK3Q9UIJ7 227 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 NOTCH4Q99466 2003 aa10□□□□□ -0.81
PCDHGC3-201ENST00000308177 SHOXO15266 292 aa9.99□□□□□ -0.81
PCDHGC3-201ENST00000308177 LYPD3O95274 346 aa9.99□□□□□ -0.81
PCDHGC3-201ENST00000308177 CTSDP07339 412 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms