RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 HOXA1P49639 335 aaPredicted RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX54-201ENST00000306014 CCL7P80098 99 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 SAMD10Q9BYL1 202 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 LPAR5Q9H1C0 372 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 LANCL2Q9NS86 450 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 PRR32B1ATL7 298 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 ADAM20O43506 726 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 CBR3O75828 277 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 PNLIPP16233 465 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 CLDN15P56746 228 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 C1orf100Q5SVJ3 147 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 LDLRAD3Q86YD5 345 aa11.72□□□□□ -0.53
DDX54-201ENST00000306014 INTS12Q96CB8 462 aaKnown RBP11.72□□□□□ -0.53
DDX54-201ENST00000306014 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 SIRPB1O00241 398 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 NCMAPQ5T1S8 102 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 GUSBP11Q6P575 273 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 FBXO17Q96EF6 278 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
DDX54-201ENST00000306014 RSPO3Q9BXY4 272 aaPredicted RBP11.71□□□□□ -0.53
DDX54-201ENST00000306014 PATZ1Q9HBE1 687 aaKnown RBP11.71□□□□□ -0.53
DDX54-201ENST00000306014 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 A8MXE2 369 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 ZNF732B4DXR9 585 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 GPM6AP51674 278 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 DSCR4P56555 118 aaPredicted RBP11.71□□□□□ -0.53
DDX54-201ENST00000306014 HTD2P86397 168 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 LYZL2Q7Z4W2 148 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 HOGA1Q86XE5 327 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 ZNF808Q8N4W9 903 aaPredicted RBP11.71□□□□□ -0.53
DDX54-201ENST00000306014 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 ARV1Q9H2C2 271 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
DDX54-201ENST00000306014 GBF1Q92538 1859 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 A8MXK9 166 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 LYPD3O95274 346 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 NAAAQ02083 359 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 RAB35Q15286 201 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 OR2I1PQ8NGU4 316 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 IFI44Q8TCB0 444 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 LHX6Q9UPM6 363 aa11.71□□□□□ -0.54
DDX54-201ENST00000306014 C3orf85A0A1B0GTC6 90 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 TGFBR3LH3BV60 316 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 MT-CO2P00403 227 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 PPP1R35Q8TAP8 253 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 AQP3Q92482 292 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 CCDC187A0A096LP49 1063 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 ADAM10O14672 748 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 CD63P08962 238 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 GABRA2P47869 451 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 RHBDD2Q6NTF9 364 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 ZDHHC23Q8IYP9 409 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 GEMIN2O14893 280 aaKnown RBP11.7□□□□□ -0.54
DDX54-201ENST00000306014 TSPAN2O60636 221 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 PDCD6O75340 191 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 RPP30P78346 268 aaKnown RBP11.7□□□□□ -0.54
DDX54-201ENST00000306014 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
DDX54-201ENST00000306014 ZNF610Q8N9Z0 462 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 DYRK2Q92630 601 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 RASL10BQ96S79 203 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 TUBG2Q9NRH3 451 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 POMT1Q9Y6A1 747 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 PLXNA3P51805 1871 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 C17orf112F2Z3M2 114 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 NPIPB9F8W1W9 429 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 DHODHQ02127 395 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 OR4F5Q8NH21 305 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
DDX54-201ENST00000306014 FREM3P0C091 2139 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 E9PQ18 207 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 MFNGO00587 321 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 SPINK2P20155 84 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 NXPH1P58417 271 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 OR2A2Q6IF42 318 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 OR13G1Q8NGZ3 307 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 NTNG2Q96CW9 530 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 THOC3Q96J01 351 aaKnown RBP11.69□□□□□ -0.54
DDX54-201ENST00000306014 GFI1Q99684 422 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 SLC2A9Q9NRM0 540 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 BTBD17A6NE02 478 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 IGHEP01854 428 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 IFI6P09912 130 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 TLE1Q04724 770 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 CLN3Q13286 438 aa11.69□□□□□ -0.54
DDX54-201ENST00000306014 VAX1Q5SQQ9 334 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms