RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 HRASLS5Q96KN8 279 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 YPEL4Q96NS1 127 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 TOLLIPQ9H0E2 274 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 GAL3ST2Q9H3Q3 398 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 SCN3BQ9NY72 215 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 DNAJC15Q9Y5T4 150 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 RNF222A6NCQ9 220 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 PDCD5O14737 125 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 UPK3AO75631 287 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 JTBO76095 146 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 SCG5P05408 212 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 CD2P06729 351 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 NCK1P16333 377 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 HOXB9P17482 250 aaPredicted RBP4.95□□□□□ -1.62
ZNF440-201ENST00000304060 HOXC5Q00444 222 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 NHLH2Q02577 135 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 SLC9A3R2Q15599 337 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 MRPL2Q5T653 305 aaKnown RBP4.95□□□□□ -1.62
ZNF440-201ENST00000304060 CD200R1LQ6Q8B3 271 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 SPNS2Q8IVW8 549 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 BOLLQ8N9W6 283 aaKnown RBP4.95□□□□□ -1.62
ZNF440-201ENST00000304060 C8orf46Q8TAG6 207 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 CNOT9Q92600 299 aaKnown RBP4.95□□□□□ -1.62
ZNF440-201ENST00000304060 LRRC58Q96CX6 371 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 NDUFB11Q9NX14 153 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 FZR1Q9UM11 496 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 TMEM14AQ9Y6G1 99 aa4.95□□□□□ -1.62
ZNF440-201ENST00000304060 J3QW42 95 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 HPGDSO60760 199 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 IGHV3-13P01766 116 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 LCATP04180 440 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ANXA7P20073 488 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 TGFBR1P36897 503 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 MAP2K4P45985 399 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 CTXN1P60606 82 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 CDC42P60953 191 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 PKIAP61925 76 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 UFM1P61960 85 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 RPS26P62854 115 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SMCO1Q147U7 214 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SEC23BQ15437 767 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR8B8Q15620 311 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ELFN2Q5R3F8 820 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 PXKQ7Z7A4 578 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 FAM71CQ8NEG0 241 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR8J3Q8NGG0 315 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR8J2Q8NGG1 315 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR9I1Q8NGQ6 314 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ZNF417Q8TAU3 575 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ZNF587Q96SQ5 575 aaPredicted RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 POLR2J2Q9GZM3 115 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 POLR2J3Q9H1A7 115 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SLC25A19Q9HC21 320 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 NDUFAF4Q9P032 175 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 MLXQ9UH92 298 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 CELSR2Q9HCU4 2923 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 CH25HO95992 272 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 PPBPP02775 128 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 RORCP51449 518 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 RAE1P78406 368 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 HAGHQ16775 308 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ALG10Q5BKT4 473 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SLC35D2Q76EJ3 337 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ZCCHC24Q8N2G6 241 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 DNAAF1Q8NEP3 725 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR6K6Q8NGW6 343 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR5J2Q8NH18 312 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 HOXB13Q92826 284 aaPredicted RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 CXorf58Q96LI9 332 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ERMAPQ96PL5 475 aaPredicted RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 GPER1Q99527 375 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 DCTN5Q9BTE1 182 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SPACA1Q9HBV2 294 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 ZNF443Q9Y2A4 671 aaPredicted RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 IRGMA1A4Y4 181 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 C3orf84H3BNL1 204 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 K7EP13 123 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 NDUFB2O95178 105 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 OR8U8P0C7N1 319 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 FUT1P19526 365 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 IL2RGP31785 369 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 S100A11P31949 105 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 BIDP55957 195 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 RBX1P62877 108 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 FAM219BQ5XKK7 198 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 TMPRSS11AQ6ZMR5 421 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 LIAT1Q6ZQX7 453 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 SSX9Q7RTT3 188 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 TMEM104Q8NE00 496 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 RRNAD1Q96FB5 475 aaKnown RBP4.94□□□□□ -1.62
ZNF440-201ENST00000304060 PGAM5Q96HS1 289 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 COPS4Q9BT78 406 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 NIT2Q9NQR4 276 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 TNFRSF11BO00300 401 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 LYRM1O43325 122 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 NDUFB3O43676 98 aa4.94□□□□□ -1.62
ZNF440-201ENST00000304060 TRAF3IP2O43734 574 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms