RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TMEM68Q96MH6 324 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 NIPSNAP3BQ9BS92 247 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF700Q9H0M5 742 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 LANCL2Q9NS86 450 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DCAF16Q9NXF7 216 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TCFL5Q9UL49 500 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 SMCO3A2RU48 225 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 STMND1H3BQB6 276 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 SEMA4FO95754 770 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 CDAP32320 146 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 BIDP55957 195 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 PLCXD2Q0VAA5 305 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 MFAP5Q13361 173 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FZD2Q14332 565 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 IL13RA2Q14627 380 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 PHLDA2Q53GA4 152 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 AKR1C8PQ5T2L2 129 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ADAMTS18Q8TE60 1221 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 C18orf12Q96KH6 178 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF581Q9P0T4 197 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 WASF3Q9UPY6 502 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 CCDC187A0A096LP49 1063 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 A0A1W2PQD3 144 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FAM24AA6NFZ4 105 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ADAM10O14672 748 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 GEMIN2O14893 280 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ST8SIA3O43173 380 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 IL18BPO95998 194 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 GZMBP10144 247 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FUT3P21217 361 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 GABRR1P24046 479 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 GALNSP34059 522 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 CEACAM6P40199 344 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ECI1P42126 302 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 NOVA1P51513 510 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 DLX2Q07687 328 aaPredicted RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 LBHQ53QV2 105 aaPredicted RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 OR5L1Q8NGL2 311 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 MRPL37Q9BZE1 423 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 MOB1AQ9H8S9 216 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 POLR1DQ9Y2S0 133 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 RER1O15258 196 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 RRADP55042 308 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FXYD4P59646 89 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 HHEXQ03014 270 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 TLE3Q04726 772 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FOXO1Q12778 655 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FAM189A2Q15884 450 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 CYB5R2Q6BCY4 276 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FAM57BQ71RH2 274 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FBXL14Q8N1E6 418 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 MSI2Q96DH6 328 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 RBM14Q96PK6 669 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 ANXA10Q9UJ72 324 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 NXT1Q9UKK6 140 aaKnown RBP9.5□□□□□ -0.89
ZNF558-201ENST00000301475 FRYLO94915 3013 aa9.5□□□□□ -0.89
ZNF558-201ENST00000301475 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 CCL1P22362 96 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 OMGP23515 440 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 DUSP1P28562 367 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 OPRM1P35372 400 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 APLNRP35414 380 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 NUTF2P61970 127 aaKnown RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 RUNX1Q01196 453 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 ZP4Q12836 540 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 JOSD1Q15040 202 aaPredicted RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 H1FNTQ75WM6 255 aaPredicted RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 P4HA3Q7Z4N8 544 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 SLC35E3Q7Z769 313 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 OR8G5Q8NG78 346 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 OR11L1Q8NGX0 322 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 TM2D1Q9BX74 207 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 C11orf1Q9H5F2 150 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 KIAA2026Q5HYC2 2103 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 PCDH15Q96QU1 1955 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 A0A087WZY1 265 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 TNFRSF10CO14798 259 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 COX5BP10606 129 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 C1orf87Q8N0U7 546 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 SLC22A18ASQ8N1D0 253 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 C17orf78Q8N4C9 275 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 LRTM2Q8N967 370 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 CLDND2Q8NHS1 167 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 FGF14Q92915 247 aa9.49□□□□□ -0.89
ZNF558-201ENST00000301475 RCC1LQ96I51 464 aaKnown RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 ELL3Q9HB65 397 aaPredicted RBP9.49□□□□□ -0.89
ZNF558-201ENST00000301475 PNRC2Q9NPJ4 139 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms