RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 ZNF705FA8MVS1 300 aaPredicted RBP11.71□□□□□ -0.54
CASC4-201ENST00000299957 PATE3B3GLJ2 98 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 E5RGE8 158 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.54
CASC4-201ENST00000299957 NXPH2O95156 264 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 ACTL6AO96019 429 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 SERPINA7P05543 415 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 ZNF705DP0CH99 300 aaPredicted RBP11.71□□□□□ -0.54
CASC4-201ENST00000299957 ZNF705BP0CI00 300 aaPredicted RBP11.71□□□□□ -0.54
CASC4-201ENST00000299957 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.54
CASC4-201ENST00000299957 RUNX1Q01196 453 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 IFI44Q8TCB0 444 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 SLC39A9Q9NUM3 307 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 LPAR3Q9UBY5 353 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 SH3BGRL2Q9UJC5 107 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 NSG2Q9Y328 171 aa11.71□□□□□ -0.54
CASC4-201ENST00000299957 MECP2P51608 486 aaKnown RBP11.7□□□□□ -0.54
CASC4-201ENST00000299957 ISXQ2M1V0 245 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
CASC4-201ENST00000299957 FGF11Q92914 225 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 THOC3Q96J01 351 aaKnown RBP11.7□□□□□ -0.54
CASC4-201ENST00000299957 ADAM19Q9H013 955 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 MMP26Q9NRE1 261 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 KCNIP1Q9NZI2 227 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 MCTS1Q9ULC4 181 aaKnown RBP11.7□□□□□ -0.54
CASC4-201ENST00000299957 NPIPB9F8W1W9 429 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 ADAM20O43506 726 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 TPPPO94811 219 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 RAC2P15153 192 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 DEFA6Q01524 100 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
CASC4-201ENST00000299957 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 HLA-CQ95604 372 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 ADIPOR1Q96A54 375 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 DHRS3O75911 302 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 SRFP11831 508 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 LPAR6P43657 344 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 GABRA2P47869 451 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 CYB561P49447 251 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 EXTL1Q92935 676 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 DUSP23Q9BVJ7 150 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 C5orf66Q9H5L9 145 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
CASC4-201ENST00000299957 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 PPP1R2P9O14990 202 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 CST4P01036 141 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 ZNF133P52736 654 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 ZNF266Q14584 549 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 ZNF468Q5VIY5 522 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 ARHGEF39Q8N4T4 335 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 NAT6Q93015 286 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 C12orf10Q9HB07 376 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 RAB18Q9NP72 206 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 LIPGQ9Y5X9 500 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 TRBV23-1A0A0A0MS06 115 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 HSPB2A8KAH6 182 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 KRASP01116 189 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 HOXC4P09017 264 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 TGFBR3Q03167 851 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 HSPB2Q16082 182 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 RPS4Y2Q8TD47 263 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 ABHD3Q8WU67 409 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 GPX7Q96SL4 187 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 FOXB1Q99853 325 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 SHARPINQ9H0F6 387 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 WASF3Q9UPY6 502 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 LHFPL6Q9Y693 200 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 TSPAN2O60636 221 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 PTAFRP25105 342 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 MPGP29372 298 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 SMAD4Q13485 552 aaKnown RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 DEGS2Q6QHC5 323 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 MOB1AQ9H8S9 216 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 AURKAIP1Q9NWT8 199 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 ANXA10Q9UJ72 324 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 DHRS7CA6NNS2 312 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 FGF2P09038 288 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 BAXQ07812 192 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 LY6G6FQ5SQ64 297 aa11.69□□□□□ -0.54
CASC4-201ENST00000299957 PHF7Q9BWX1 381 aaPredicted RBP11.69□□□□□ -0.54
CASC4-201ENST00000299957 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
CASC4-201ENST00000299957 ZFHX2Q9C0A1 2572 aaPredicted RBP11.68□□□□□ -0.54
CASC4-201ENST00000299957 LINC00271P0C7V0 271 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms