RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TNFSF12O43508 249 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 CST7O76096 145 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 NXPH3O95157 252 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 FUT3P21217 361 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 SFTPDP35247 375 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 RAB11AP62491 216 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 NKAIN1Q4KMZ8 207 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF880Q6PDB4 577 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 C9orf40Q8IXQ3 194 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF664Q8N3J9 261 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 NEU1Q99519 415 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 DUSP15Q9H1R2 295 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-201ENST00000299866 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 ANXA10Q9UJ72 324 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 C9J4A7 227 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 E9PLN8 166 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 HOXB2P14652 356 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 HLA-DRB3P79483 266 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 OR2C3Q8N628 320 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 TMEM68Q96MH6 324 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
TVP23A-201ENST00000299866 MED12Q93074 2177 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-201ENST00000299866 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.38□□□□□ -0.59
TVP23A-201ENST00000299866 HNRNPA2B1P22626 353 aaKnown RBP11.38□□□□□ -0.59
TVP23A-201ENST00000299866 CLRN1P58418 232 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 PPA1Q15181 289 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 RTL10Q7L3V2 364 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 OR13H1Q8NG92 308 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF721Q8TF20 911 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 HSF4Q9ULV5 492 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 IGSF23A1L1A6 192 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 A8MWP6 167 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 EREGO14944 169 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 TSPAN2O60636 221 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 DDAH2O95865 285 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 TNFP01375 233 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 FOLR1P15328 257 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 FAHP16930 419 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 FGF7P21781 194 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 ECI1P42126 302 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 CD81P60033 236 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 GABREP78334 506 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 TAF9Q16594 264 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 OR13D1Q8NGV5 346 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 ADAMTS18Q8TE60 1221 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 PGAM5Q96HS1 289 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 BOD1Q96IK1 185 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
TVP23A-201ENST00000299866 FAM221BA6H8Z2 402 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 GZMBP10144 247 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF43P17038 809 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 KIR2DL1P43626 348 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-201ENST00000299866 CHST11Q9NPF2 352 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 GNG13Q9P2W3 67 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 RANBP2P49792 3224 aaKnown RBP11.37□□□□□ -0.59
TVP23A-201ENST00000299866 BLACEA4D250 179 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 FOXI3A8MTJ6 420 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-201ENST00000299866 ANGPTL7O43827 346 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 NTSR1P30989 418 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 CD200P41217 278 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 FBXW4P57775 412 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF266Q14584 549 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 FAM180AQ6UWF9 173 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 DOK3Q7L591 496 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 LGI3Q8N145 548 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 OR5C1Q8NGR4 320 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 THAP3Q8WTV1 239 aaPredicted RBP11.37□□□□□ -0.59
TVP23A-201ENST00000299866 TMEM171Q8WVE6 324 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 GPR87Q9BY21 358 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 MRPL37Q9BZE1 423 aaKnown RBP11.37□□□□□ -0.59
TVP23A-201ENST00000299866 SLC2A9Q9NRM0 540 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 F5H5K5 113 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 MSTNO14793 375 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 HSPA12AO43301 675 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 SSSCA1O60232 199 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 SOX15O60248 233 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 CTSEP14091 401 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 MMP9P14780 707 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 TCEAL6Q6IPX3 200 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 SLC35G3Q8N808 338 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 LANCL2Q9NS86 450 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 OR14J1Q9UGF5 321 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 SHANK1Q9Y566 2161 aa11.37□□□□□ -0.59
TVP23A-201ENST00000299866 NKX2-6A6NCS4 301 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 ZFP92A6NM28 416 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 MKRN2OSH3BPM6 223 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 IGKV3-11P04433 115 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 NR2C1P13056 603 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 TUBG1P23258 451 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 FOXO1Q12778 655 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms