RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 PPA2Q9H2U2 334 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 PLSCR4Q9NRQ2 329 aa14.54□□□□□ -0.08
CPSF4-201ENST00000292476 SLC2A1P11166 492 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 NAT2P11245 290 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 TIMP3P35625 211 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 NUP62P37198 522 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-201ENST00000292476 RSPO1Q2MKA7 263 aaPredicted RBP14.53□□□□□ -0.08
CPSF4-201ENST00000292476 PABPC1L2AQ5JQF8 200 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 PLAC9Q5JTB6 97 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 C1orf185Q5T7R7 199 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 C9orf135Q5VTT2 229 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 C17orf107Q6ZR85 190 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 GCNT2Q8N0V5 402 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 TMEM104Q8NE00 496 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 OR1S1Q8NH92 325 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 AKR7LQ8NHP1 331 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 CXorf58Q96LI9 332 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 GPER1Q99527 375 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 NICN1Q9BSH3 213 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 GLS2Q9UI32 602 aa14.53□□□□□ -0.08
CPSF4-201ENST00000292476 A0A096LPE4 126 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 IGKV1-9A0A0C4DH69 117 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 A0A1W2PPZ6 126 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 PRRG2O14669 202 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 WISP2O76076 250 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 CD79AP11912 226 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 FPR2P25090 351 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 KIR2DL2P43627 348 aaPredicted RBP14.52□□□□□ -0.08
CPSF4-201ENST00000292476 TAS2R46P59540 309 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 RAB1AP62820 205 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 PRR30Q53SZ7 412 aaPredicted RBP14.52□□□□□ -0.08
CPSF4-201ENST00000292476 TMEM128Q5BJH2 165 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 TMEM17Q86X19 198 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 C1orf162Q8NEQ5 155 aaPredicted RBP14.52□□□□□ -0.08
CPSF4-201ENST00000292476 THAP6Q8TBB0 222 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 PPP1R1CQ8WVI7 109 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 BCL2L2Q92843 193 aaPredicted RBP14.52□□□□□ -0.08
CPSF4-201ENST00000292476 BOD1Q96IK1 185 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 TM2D1Q9BX74 207 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 NMES1Q9C002 83 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 CHST5Q9GZS9 411 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 RASL12Q9NYN1 266 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 PROCRQ9UNN8 238 aa14.52□□□□□ -0.08
CPSF4-201ENST00000292476 FOXI3A8MTJ6 420 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-201ENST00000292476 SERPINE3A8MV23 424 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 XRCC2O43543 280 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 IL18BPO95998 194 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 LCATP04180 440 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 PTGFRP43088 359 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 TMEM50BP56557 158 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 RBPJQ06330 500 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 MICBQ29980 383 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 SLC22A6Q4U2R8 563 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 PEG10Q86TG7 708 aaKnown RBP14.52□□□□□ -0.09
CPSF4-201ENST00000292476 BVESQ8NE79 360 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 ST8SIA4Q92187 359 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 ZNF230Q9UIE0 474 aaPredicted RBP14.52□□□□□ -0.09
CPSF4-201ENST00000292476 GPR132Q9UNW8 380 aa14.52□□□□□ -0.09
CPSF4-201ENST00000292476 TRBV6-7A0A0A0MS04 114 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 RNF222A6NCQ9 220 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 BET1O15155 118 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 SOCS1O15524 211 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 CRTAPO75718 401 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 SPDEFO95238 335 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 PMP2P02689 132 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 RLN2P04090 185 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 DBHP09172 617 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 PATE4P0C8F1 98 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 HOXC12P31275 282 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 UBE2NP61088 152 aaKnown RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 SURF2Q15527 256 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 KISS1Q15726 138 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 IGFBP7Q16270 282 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 BEND4Q6ZU67 534 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 CISD2Q8N5K1 135 aaKnown RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 OR5H2Q8NGV7 314 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 CPNE2Q96FN4 548 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 LYZL4Q96KX0 146 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 VRK1Q99986 396 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 SOX7Q9BT81 388 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 FN3KRPQ9HA64 309 aa14.51□□□□□ -0.09
CPSF4-201ENST00000292476 FASNP49327 2511 aaKnown RBP14.51□□□□□ -0.09
CPSF4-201ENST00000292476 NCOA6Q14686 2063 aaPredicted RBP14.5□□□□□ -0.09
CPSF4-201ENST00000292476 HLA-HP01893 362 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 ECI1P42126 302 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 P2RY6Q15077 328 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 GFOD2Q3B7J2 385 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 MOB3CQ70IA8 216 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 LHFPL1Q86WI0 220 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 ADAD2Q8NCV1 583 aaKnown RBP14.5□□□□□ -0.09
CPSF4-201ENST00000292476 GALNT11Q8NCW6 608 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 PXT1Q8NFP0 134 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 FGFBP3Q8TAT2 258 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 CCDC120Q96HB5 630 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 SPACA5Q96QH8 159 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 C1QTNF5Q9BXJ0 243 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 RAB18Q9NP72 206 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 SPEF1Q9Y4P9 236 aa14.5□□□□□ -0.09
CPSF4-201ENST00000292476 J3QKU1 62 aa14.49□□□□□ -0.09
CPSF4-201ENST00000292476 SERPINA5P05154 406 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms