RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 FAM90A8PA6NJQ4 464 aa20.43■□□□□ 0.86
U2AF1-201ENST00000291552 ODF3BA8MYP8 253 aa20.43■□□□□ 0.86
U2AF1-201ENST00000291552 TP53I3Q53FA7 332 aa20.43■□□□□ 0.86
U2AF1-201ENST00000291552 RDH10Q8IZV5 341 aa20.43■□□□□ 0.86
U2AF1-201ENST00000291552 SLC7A11Q9UPY5 501 aa20.43■□□□□ 0.86
U2AF1-201ENST00000291552 DNAH3Q8TD57 4116 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 INMTO95050 263 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 KIR2DS4P43632 304 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 FUT6P51993 359 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 SLC25A26Q70HW3 274 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 OR4C13Q8NGP0 309 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 FOXJ3Q9UPW0 622 aa20.42■□□□□ 0.86
U2AF1-201ENST00000291552 hCG_1809904A0A1W2PP81 198 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 A0A1W2PPE2 198 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 A0A1W2PR64 198 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 A0A1W2PRV1 198 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 GATBO75879 557 aaKnown RBP20.41■□□□□ 0.86
U2AF1-201ENST00000291552 RASSF2P50749 326 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 TMED1Q13445 227 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 C2orf68Q2NKX9 166 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 OR8H2Q8N162 312 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 ADAT3Q96EY9 351 aaPredicted RBP20.41■□□□□ 0.86
U2AF1-201ENST00000291552 RANBP3Q9H6Z4 567 aaPredicted RBP20.41■□□□□ 0.86
U2AF1-201ENST00000291552 GNG8Q9UK08 70 aa20.41■□□□□ 0.86
U2AF1-201ENST00000291552 IGKV1-9A0A0C4DH69 117 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 VGLL3A8MV65 326 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 CHRM2P08172 466 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 ZNF728P0DKX0 622 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 HERPUD1Q15011 391 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 PLA1AQ53H76 456 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 KLHDC1Q8N7A1 406 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 CCDC54Q8NEL0 328 aa20.4■□□□□ 0.86
U2AF1-201ENST00000291552 E9PQ18 207 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 IGHA1P01876 353 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 RBP4P02753 201 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 UBCP0CG48 685 aaKnown RBP20.39■□□□□ 0.85
U2AF1-201ENST00000291552 LGALS4P56470 323 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 EDDM3BP56851 147 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 ZNF626Q68DY1 528 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 CCBE1Q6UXH8 406 aaPredicted RBP20.39■□□□□ 0.85
U2AF1-201ENST00000291552 C1QL4Q86Z23 238 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 OR52N4Q8NGI2 321 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 OR2G2Q8NGZ5 317 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 CFHR4Q92496 578 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 BORCS8Q96FH0 119 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 ZNF702PQ9H963 129 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 RAB18Q9NP72 206 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 RBFOX1Q9NWB1 397 aaKnown RBP20.39■□□□□ 0.85
U2AF1-201ENST00000291552 NOTCH3Q9UM47 2321 aa20.39■□□□□ 0.85
U2AF1-201ENST00000291552 J3QRE1 110 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ENTPD6O75354 484 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ATP5HO75947 161 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ARG1P05089 322 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 CSF1P09603 554 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 IGHV1-8P0DP01 117 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ATP6V1E1P36543 226 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 NPBWR2P48146 333 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 RAB13P51153 203 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 NANOS3P60323 173 aaKnown RBP20.38■□□□□ 0.85
U2AF1-201ENST00000291552 CDC42P60953 191 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ZNF91Q05481 1191 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 GDPD3Q7L5L3 318 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 FAM220AQ7Z4H9 259 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 EGFL6Q8IUX8 553 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 TPRX1Q8N7U7 411 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 C11orf44Q8N8P7 122 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 PYDC1Q8WXC3 89 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 PP6455Q8WZ26 134 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 EMG1Q92979 244 aaKnown RBP20.38■□□□□ 0.85
U2AF1-201ENST00000291552 C10orf35Q96D05 121 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 SNX22Q96L94 193 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 ADI1Q9BV57 179 aa20.38■□□□□ 0.85
U2AF1-201ENST00000291552 HAND1O96004 215 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 ALPLP05186 524 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 JUNBP17275 347 aaPredicted RBP20.37■□□□□ 0.85
U2AF1-201ENST00000291552 BCL3P20749 454 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 EDDM3AQ14507 147 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 CNN3Q15417 329 aaKnown RBP20.37■□□□□ 0.85
U2AF1-201ENST00000291552 LIAT1Q6ZQX7 453 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 Q6ZTK2 550 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 RNF144BQ7Z419 303 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 OR11H6Q8NGC7 330 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 OR10AC1Q8NH08 325 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 OR2T6Q8NHC8 308 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 RFKQ969G6 155 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 NPFFR1Q9GZQ6 430 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 CHST6Q9GZX3 395 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 SEBOXQ9HB31 216 aaPredicted RBP20.37■□□□□ 0.85
U2AF1-201ENST00000291552 TCF19Q9Y242 345 aa20.37■□□□□ 0.85
U2AF1-201ENST00000291552 TBL2Q9Y4P3 447 aaKnown RBP20.37■□□□□ 0.85
U2AF1-201ENST00000291552 PSPNO60542 156 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 DUSP1P28562 367 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 POU3F4P49335 361 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 HABP2Q14520 560 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-201ENST00000291552 C11orf88Q6PI97 169 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 DNAAF1Q8NEP3 725 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 OR13D1Q8NGV5 346 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 FOXRED1Q96CU9 486 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-201ENST00000291552 ZNF714Q96N38 554 aa20.36■□□□□ 0.85
U2AF1-201ENST00000291552 FRRS1LQ9P0K9 344 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms