RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DMRTC1Q5HYR2 192 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF684Q5T5D7 378 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 C19orf48Q6RUI8 117 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SFTPA2Q8IWL1 248 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 EXTL1Q92935 676 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 CLCF1Q9UBD9 225 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 RP1L1Q8IWN7 2480 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 A0A1B0GTH9 108 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 HSBP1O75506 76 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GABRA2P47869 451 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 HTR5AP47898 357 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GABRA4P48169 554 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 DCAF12L2Q5VW00 463 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 LRP11Q86VZ4 500 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 CPEB3Q8NE35 698 aaKnown RBP10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC26A10Q8NG04 563 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 ASB5Q8WWX0 329 aa10.1□□□□□ -0.79
NPC1L1-201ENST00000289547 GLRA1P23415 457 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 OR10G3Q8NGC4 313 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 DTD1Q8TEA8 209 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 FBLIM1Q8WUP2 373 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 EMC6Q9BV81 110 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 OR51B6Q9H340 312 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 SLC17A5Q9NRA2 495 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PIGLQ9Y2B2 252 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 TMEM272A0A1B0GTI8 110 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 RBFOX3A6NFN3 312 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 TERTO14746 1132 aaKnown RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 NKX2-8O15522 239 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PRAMEF4O60810 478 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 BATF2Q8N1L9 274 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 SLAMF6Q96DU3 332 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 CHST6Q9GZX3 395 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PLEKHF2Q9H8W4 249 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 MSL2Q9HCI7 577 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 HEYLQ9NQ87 328 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 BET1LQ9NYM9 111 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PQLC2LA1A4F0 135 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 FGF2P09038 288 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 IAPPP10997 89 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 MUC1P15941 1255 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PTGER4P35408 488 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 EMC4Q5J8M3 183 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 CISD2Q8N5K1 135 aaKnown RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 MSI2Q96DH6 328 aaKnown RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PIK3IP1Q96FE7 263 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 BOD1Q96IK1 185 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 HIPK2Q9H2X6 1198 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 DMRT1Q9Y5R6 373 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 HSPB2A8KAH6 182 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 ERGP11308 486 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 FPR2P25090 351 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 HSF1Q00613 529 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 HSPB2Q16082 182 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 LBHQ53QV2 105 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 KRTCAP3Q53RY4 240 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 LAMTOR1Q6IAA8 161 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 DOK3Q7L591 496 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 C22orf15Q8WYQ4 148 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 PRO3102Q9H379 93 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
NPC1L1-201ENST00000289547 CDRT15L2A8MXV6 281 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OPN1MWP04001 364 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 ERVS71-1P61550 626 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 TMEM241Q24JQ0 296 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 WIPI1Q5MNZ9 446 aaPredicted RBP10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 VHLLQ6RSH7 139 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 KIRREL2Q6UWL6 708 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 TMPRSS11FQ6ZWK6 438 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 RND1Q92730 232 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 GPR84Q9NQS5 396 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 LIPGQ9Y5X9 500 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 R4GMQ9 66 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SIP14410 1827 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 COL4A6Q14031 1691 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 MPTX1A8MV57 137 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 CDC42EP2O14613 210 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 RECKO95980 971 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 ACTL6AO96019 429 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 NBL1P41271 181 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 KLRB1Q12918 225 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 Q6ZN92 141 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 GVQW1Q8N7I0 195 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OR52N5Q8NH56 324 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 OBP2BQ9NPH6 170 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC2A9Q9NRM0 540 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 DECR2Q9NUI1 292 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms