RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TPPP3Q9BW30 176 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 HEYLQ9NQ87 328 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 MGAT4CQ9UBM8 478 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 WIPF3A6NGB9 483 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 SPINT2O43291 252 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 CRYBB2P43320 205 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 HFEQ30201 348 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 SLC16A12Q6ZSM3 486 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 DOK3Q7L591 496 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 C15orf40Q8WUR7 153 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 ITLN2Q8WWU7 325 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 TMIGD2Q96BF3 282 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 SGK3Q96BR1 496 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 FUNDC2Q9BWH2 189 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 V9GYS6 101 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 E9PI62 339 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 SLC22A1O15245 554 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 GPX5O75715 221 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 IFNA7P01567 189 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 FSTP19883 344 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 UQCRFS1P47985 274 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 CAV3P56539 151 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 MOB3BQ86TA1 216 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 NUP37Q8NFH4 326 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 METTL9Q9H1A3 318 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 BANF2Q9H503 90 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 SERTAD4Q9NUC0 356 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 EHFQ9NZC4 300 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 PFDN2Q9UHV9 154 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 KLF2Q9Y5W3 355 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB3DO95716 219 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 TTRP02766 147 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 Q499Y3 187 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 PDLIM3Q53GG5 364 aaPredicted RBP7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 BAIAP2L2Q6UXY1 529 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 ZFAND2BQ8WV99 257 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 PBDC1Q9BVG4 233 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 KIF25Q9UIL4 384 aa7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 SIRT4Q9Y6E7 314 aaPredicted RBP7.27□□□□□ -1.24
PTPDC1-201ENST00000288976 LOC400499M0QZD8 3231 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 KMT2BQ9UMN6 2715 aaPredicted RBP7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 USP24Q9UPU5 2620 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 TRBV5-7A0A0A0MS05 114 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 IGHV1-18A0A0C4DH31 117 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 MDFIC2A0A1B0GVS7 189 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 DEGS1O15121 323 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 ATG12O94817 140 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 ALX3O95076 343 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 SELEP16581 610 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 PRKACAP17612 351 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 IL3RAP26951 378 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RPS25P62851 125 aaKnown RBP7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 PCGF3Q3KNV8 242 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 OR8B12Q8NGG6 310 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 CACNG6Q9BXT2 260 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 SMIM3Q9BZL3 60 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 CMAHPQ9Y471 501 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 MAGEB4O15481 346 aaPredicted RBP7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 PNPP00491 289 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 CFPP27918 469 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 GSK3AP49840 483 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RPS11P62280 158 aaKnown RBP eCLIP7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RIPPLY1Q0D2K3 151 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 PRDX4Q13162 271 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 IGFBP7Q16270 282 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 OR2T2Q6IF00 324 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 NCCRP1Q6ZVX7 275 aaPredicted RBP7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 AKAP14Q86UN6 197 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 GHSRQ92847 366 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 ISOC1Q96CN7 298 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RSRP1Q9BUV0 290 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 KIAA1456Q9P272 454 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 FOXJ3Q9UPW0 622 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 TRAV1-2A0A0B4J238 106 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 M0QZ24 198 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 ZFPL1O95159 310 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RAB13P51153 203 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 DEFA5Q01523 94 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 FAM27E3Q08E93 113 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF404Q494X3 552 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 RNF150Q9ULK6 438 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 PRELID3BQ9Y3B1 194 aa7.27□□□□□ -1.25
PTPDC1-201ENST00000288976 CLEC18AA5D8T8 446 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 GABRPO00591 440 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 SMPD2O60906 423 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 APEX1P27695 318 aaKnown RBP7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 RPS16P62249 146 aaKnown RBP7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 PDCD1Q15116 288 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 CLEC18BQ6UXF7 455 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 SGPP2Q8IWX5 399 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 CDH26Q8IXH8 852 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 Q8N402 240 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 CLEC18CQ8NCF0 446 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 BORCS5Q969J3 196 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 LAMP3Q9UQV4 416 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 IGHV2OR16-5A0A0B4J2B6 119 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 LOC107986453A0A1B0GWG9 222 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
PTPDC1-201ENST00000288976 DHRS3O75911 302 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms