RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ZMAT5Q9UDW3 170 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 DNAJC13O75165 2243 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 TLX3O43711 291 aaPredicted RBP15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 JTBO76095 146 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 RAC3P60763 192 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 SNRPEP62304 92 aaKnown RBP15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 SULF2Q8IWU5 870 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 KDF1Q8NAX2 398 aaPredicted RBP15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 OR2M7Q8NG81 312 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 LYPD6BQ8NI32 183 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 CACFD1Q9UGQ2 172 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 EDARQ9UNE0 448 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 CRTAPO75718 401 aaPredicted RBP15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 RCC1P18754 421 aaPredicted RBP15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 GLRA1P23415 457 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 SRYQ05066 204 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 RBM39Q14498 530 aaKnown RBP15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 DMRTC1Q5HYR2 192 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 ABHD12BQ7Z5M8 362 aaPredicted RBP15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 COMMD2Q86X83 199 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 CNTNAP3Q9BZ76 1288 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 OR10A2Q9H208 303 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 C5orf52A6NGY3 159 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 E9PLN8 166 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 VAMP5O95183 116 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 HCKP08631 526 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 HOXB5P09067 269 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 VASH2Q86V25 355 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 LURAP1LQ8IV03 231 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 FAM89BQ8N5H3 189 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 CSNK2A3Q8NEV1 391 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 TMEM54Q969K7 222 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 C14orf79Q96F83 325 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 ADGRG7Q96K78 797 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 C1orf123Q9NWV4 160 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 FAM186AA6NE01 2351 aa15.94■□□□□ 0.14
PDLIM3-201ENST00000284767 GJE1A6NN92 205 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 UBE2CO00762 179 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF708P17019 499 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 RPL12P30050 165 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 SNU13P55769 128 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 GFRA1P56159 465 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF121P58317 390 aaPredicted RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 SMCO1Q147U7 214 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 Q6ZRG5 221 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 OR8B12Q8NGG6 310 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ABHD3Q8WU67 409 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 EHFQ9NZC4 300 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 C14orf166Q9Y224 244 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 OR5H15A6NDH6 313 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 C9JQL5 133 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 K7EPK0 472 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 HTR3BO95264 441 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 S100A9P06702 114 aaKnown RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 SFTPBP07988 381 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 CCL1P22362 96 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ECI1P42126 302 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 MAGEA5P43359 124 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF84P51523 738 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 FAM71E2Q8N5Q1 922 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 SSC4DQ8WTU2 575 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 KCNE4Q8WWG9 221 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 HIST1H2BAQ96A08 127 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 NABP1Q96AH0 204 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ALKBH3Q96Q83 286 aaPredicted RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 CLCC1Q96S66 551 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 GPER1Q99527 375 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ST6GALNAC5Q9BVH7 336 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 ULBP2Q9BZM5 246 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 GPR84Q9NQS5 396 aa15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 FOXD3Q9UJU5 478 aaPredicted RBP15.93■□□□□ 0.14
PDLIM3-201ENST00000284767 A0A1W2PP11 408 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF716A6NP11 495 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 AGPAT2O15120 278 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 IFNA2P01563 188 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 MT-ND4LP03901 98 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 FAM3AP98173 230 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ENDOGQ14249 297 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 COMMD1Q8N668 190 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 OR2V1Q8NHB1 315 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF703Q9H7S9 590 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 GHRLQ9UBU3 117 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ARGFXA6NJG6 315 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 LINC01387J3KSC0 135 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 DHHO43323 396 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 S100A6P06703 90 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 CPT2P23786 658 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 RBMXP38159 391 aaKnown RBP15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 TCF15Q12870 199 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 GALNTL5Q7Z4T8 443 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF561Q8N587 486 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 AKR1E2Q96JD6 320 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 ZNF251Q9BRH9 671 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 TUBA4BQ9H853 241 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 BOKQ9UMX3 212 aaPredicted RBP15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 FRYQ5TBA9 3013 aa15.92■□□□□ 0.14
PDLIM3-201ENST00000284767 SDCBPO00560 298 aaPredicted RBP15.91■□□□□ 0.14
PDLIM3-201ENST00000284767 MSR1P21757 451 aa15.91■□□□□ 0.14
PDLIM3-201ENST00000284767 KCNMB1Q16558 191 aa15.91■□□□□ 0.14
PDLIM3-201ENST00000284767 IAH1Q2TAA2 248 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms