RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 RAF1P04049 648 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GLB1P16278 677 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TCN2P20062 427 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 APLNRP35414 380 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RFX2P48378 723 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CSRP3P50461 194 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CLDN20P56880 219 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RAB5BP61020 215 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 DOC2BQ14184 412 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 EBPQ15125 230 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 AKR1C8PQ5T2L2 129 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ASPHD2Q6ICH7 369 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 C5orf46Q6UWT4 87 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FBXW12Q6X9E4 464 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 C16orf47Q6ZP98 133 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC43A2Q8N370 569 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CCDC71LQ8N9Z2 235 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF680Q8NEM1 530 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR10R2Q8NGX6 335 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR1S1Q8NH92 325 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RBPMSQ93062 196 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLAMF6Q96DU3 332 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PELI1Q96FA3 418 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 BOD1Q96IK1 185 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF48Q96MX3 618 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF285Q96NJ3 590 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PBDC1Q9BVG4 233 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LAT2Q9GZY6 243 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PARP12Q9H0J9 701 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 CDH20Q9HBT6 801 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ENY2Q9NPA8 101 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 KCNJ16Q9NPI9 418 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 POMT2Q9UKY4 750 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 MCTS1Q9ULC4 181 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 PIGLQ9Y2B2 252 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SIRT4Q9Y6E7 314 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLCO1B1Q9Y6L6 691 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IGHV5-51A0A0C4DH38 117 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LOC102725191A0A1B0GVB3 256 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 A0A1B0GX12 115 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR2M5A3KFT3 312 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FTCDNL1E5RQL4 147 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 STMND1H3BQB6 276 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 K7EPK0 472 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GPR171O14626 319 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 MED6O75586 246 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SCO1O75880 301 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 OR2J2O76002 312 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 DFFBO76075 338 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CDKN2AP42771 156 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 ARG2P78540 354 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RIPPLY1Q0D2K3 151 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RBM39Q14498 530 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC17A1Q14916 467 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZIC1Q15915 447 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RNF151Q2KHN1 245 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IAH1Q2TAA2 248 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 PHYHD1Q5SRE7 291 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 SLC51BQ86UW2 128 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FJX1Q86VR8 437 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RPS19BP1Q86WX3 136 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 SFTPA2Q8IWL1 248 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GABRG1Q8N1C3 465 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 RELL2Q8NC24 303 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 GJC3Q8NFK1 279 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TAAR8Q969N4 342 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 NTNG2Q96CW9 530 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LRRC61Q9BV99 259 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 NUDT9Q9BW91 350 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 BARHL1Q9BZE3 327 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FKRPQ9H9S5 495 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PIPOXQ9P0Z9 390 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TRAPPC4Q9Y296 219 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 WIF1Q9Y5W5 379 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IGHV3-15A0A0B4J1V0 119 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TRAV24A0A0B4J272 114 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 IGHV3-64DA0A0J9YX35 117 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 FRG2CA6NGY1 282 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TRAPPC2LH3BP13 241 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 K7EQS6 105 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TOR1AO14656 332 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PLPP2O43688 288 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GCM2O75603 506 aaPredicted RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 ICAM2P13598 275 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 GNB3P16520 340 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PRKACAP17612 351 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 CD1BP29016 333 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 EIF1P41567 113 aaKnown RBP2.52□□□□□ -2.01
HERC4-201ENST00000277817 MMP15P51511 669 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 TAS2R46P59540 309 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PCBD1P61457 104 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PLA2G7Q13093 441 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 ZNF74Q16587 644 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 LINC00303Q3SY05 128 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PHLDA2Q53GA4 152 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 DCAF12Q5T6F0 453 aa2.52□□□□□ -2.01
HERC4-201ENST00000277817 PXDC1Q5TGL8 231 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms