RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RGS11O94810 467 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 HLA-AP01891 365 aaKnown RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 CRYABP02511 175 aaKnown RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A15PP0C7V4 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A13PP0C7W8 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A14PP0C7W9 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FAM90A24PP0C7X0 464 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 AKR1C4P17516 323 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 HLA-GP17693 338 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 FPR2P25090 351 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 NPY4RP50391 375 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 TAS2R31P59538 309 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PPP1CBP62140 327 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 IL13RA1P78552 427 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 LY6G6FQ5SQ64 297 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 SPATA46Q5T0L3 261 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 AADACL3Q5VUY0 350 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 C11orf88Q6PI97 169 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PEG10Q86TG7 708 aaKnown RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 MITD1Q8WV92 249 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 C5orf66Q9H5L9 145 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 ZNF71Q9NQZ8 489 aaPredicted RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 ANXA10Q9UJ72 324 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 PROCRQ9UNN8 238 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 NOP16Q9Y3C1 178 aaKnown RBP8.22□□□□□ -1.09
TRIM55-201ENST00000276573 DMXL1Q9Y485 3027 aa8.22□□□□□ -1.09
TRIM55-201ENST00000276573 OR5B21A6NL26 309 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 F8VVB4 439 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 F8VWA3 439 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 TRAPPC2LH3BP13 241 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 MKRN2OSH3BPM6 223 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 SYNGR1O43759 233 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 TSC22D2O75157 780 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 SNAPC5O75971 98 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 AGFG2O95081 481 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 CRHP06850 196 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 FCGR3AP08637 254 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 CA6P23280 308 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 OPRM1P35372 400 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 UCP2P55851 309 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 PER3P56645 1201 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 FGF12P61328 243 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 GNG3P63215 75 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 SRSF4Q08170 494 aaKnown RBP8.21□□□□□ -1.09
TRIM55-201ENST00000276573 TMEM128Q5BJH2 165 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 NHLRC3Q5JS37 347 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 CXorf67Q86X51 503 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-201ENST00000276573 ZNF573Q86YE8 665 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 BATF2Q8N1L9 274 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 CCDC120Q96HB5 630 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 DOCK7Q96N67 2140 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.09
TRIM55-201ENST00000276573 C1QTNF6Q9BXI9 259 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 OR2J1Q9GZK6 312 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 SLC23A1Q9UHI7 598 aa8.21□□□□□ -1.09
TRIM55-201ENST00000276573 MUC6Q6W4X9 2439 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 OR5H14A6NHG9 310 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 HMSDA8MTL9 139 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 MCRIP1C9JLW8 97 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 WDR1O75083 606 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 DUS4LO95620 317 aaKnown RBP8.21□□□□□ -1.1
TRIM55-201ENST00000276573 IGKV3-15P01624 115 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 RAC2P15153 192 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 NFYAP23511 347 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-201ENST00000276573 ARPC4P59998 168 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 P2RY6Q15077 328 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 KRTCAP3Q53RY4 240 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 TMEM211Q6ICI0 200 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 LIN54Q6MZP7 749 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 HAGHLQ6PII5 290 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF767PQ75MW2 155 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 OR5M8Q8NGP6 311 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 SLC25A40Q8TBP6 338 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 DYRK2Q92630 601 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 TMEM230Q96A57 120 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 PHB2Q99623 299 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 SCNM1Q9BWG6 230 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-201ENST00000276573 OR51I2Q9H344 312 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 HEXA-AS1Q9H8Q6 139 aa8.21□□□□□ -1.1
TRIM55-201ENST00000276573 FAM221AA4D161 298 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 TPD52L2O43399 206 aaKnown RBP8.2□□□□□ -1.1
TRIM55-201ENST00000276573 OR7C1O76099 320 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-201ENST00000276573 SLC34A2O95436 690 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 PPP3CBP16298 524 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 CXCL2P19875 107 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 GLRA1P23415 457 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 VAMP1P23763 118 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 SSTR2P30874 369 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 HOXC12P31275 282 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 PTGER4P35408 488 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF81P51508 661 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 ERVS71-1P61550 626 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 SURF2Q15527 256 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF660Q6AZW8 331 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-201ENST00000276573 LPCAT3Q6P1A2 487 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 DHRS11Q6UWP2 260 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms