RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SEH1LQ96EE3 360 aa20.93■□□□□ 0.94
SSBP4-201ENST00000270061 CBLN4Q9NTU7 201 aa20.93■□□□□ 0.94
SSBP4-201ENST00000270061 NLKQ9UBE8 527 aa20.93■□□□□ 0.94
SSBP4-201ENST00000270061 NF1P21359 2839 aa20.93■□□□□ 0.94
SSBP4-201ENST00000270061 CRTAPO75718 401 aaPredicted RBP20.92■□□□□ 0.94
SSBP4-201ENST00000270061 LPLP06858 475 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 CECR9P0C854 216 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 ZNF35P13682 527 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 TUBG1P23258 451 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 VEGFCP49767 419 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 PRDX4Q13162 271 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 PXT1Q8NFP0 134 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 MARVELD1Q9BSK0 173 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 PAPOLGQ9BWT3 736 aaKnown RBP20.92■□□□□ 0.94
SSBP4-201ENST00000270061 TM2D1Q9BX74 207 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 TUBG2Q9NRH3 451 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 A0A0A6YYD4 124 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 TMEM225BP0DP42 221 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 UCP2P55851 309 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 PPP1CBP62140 327 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 CEACAM21Q3KPI0 293 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 OLFML2AQ68BL7 652 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 OR56B1Q8NGI3 324 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 METTL9Q9H1A3 318 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 BANF2Q9H503 90 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 HRASLSQ9HDD0 168 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 COPZ2Q9P299 210 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 GPR160Q9UJ42 338 aa20.92■□□□□ 0.94
SSBP4-201ENST00000270061 CSPG4Q6UVK1 2322 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 ZNF780AO75290 641 aaPredicted RBP20.91■□□□□ 0.94
SSBP4-201ENST00000270061 CSF1P09603 554 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 APOBEC3AP31941 199 aaPredicted RBP20.91■□□□□ 0.94
SSBP4-201ENST00000270061 NAAAQ02083 359 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 UNQ6126/PRO20091Q6UXV3 157 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 ZDHHC23Q8IYP9 409 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 CHAC2Q8WUX2 184 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 CREB3L1Q96BA8 519 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 DPAGT1Q9H3H5 408 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 IL36GQ9NZH8 169 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 MPC1Q9Y5U8 109 aa20.91■□□□□ 0.94
SSBP4-201ENST00000270061 A0A1W2PP11 408 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 PQLC2LA1A4F0 135 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 H7C1Q1 480 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 MGMTP16455 207 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 ACTBP60709 375 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 ACTG1P63261 375 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 GUCA2AQ02747 115 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 PDZK1IP1Q13113 114 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 CDNFQ49AH0 187 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 C11orf71Q6IPW1 123 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 Q6ZTK2 550 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 ZSCAN4Q8NAM6 433 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-201ENST00000270061 NICN1Q9BSH3 213 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 CACNG6Q9BXT2 260 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 ZNF107Q9UII5 783 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-201ENST00000270061 ANKRD30BLA7E2S9 258 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 C1orf174Q8IYL3 243 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 CHST4Q8NCG5 386 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 OR5A2Q8NGI9 324 aa20.9■□□□□ 0.94
SSBP4-201ENST00000270061 GSX1Q9H4S2 264 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-201ENST00000270061 FOXI3A8MTJ6 420 aaPredicted RBP20.89■□□□□ 0.93
SSBP4-201ENST00000270061 GSTP1P09211 210 aaKnown RBP20.89■□□□□ 0.93
SSBP4-201ENST00000270061 RAC2P15153 192 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 SERPINA2P20848 420 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 PCGF3Q3KNV8 242 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 GLCCI1Q86VQ1 547 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 CIARTQ8N365 385 aaPredicted RBP20.89■□□□□ 0.93
SSBP4-201ENST00000270061 HPSE2Q8WWQ2 592 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 CMBLQ96DG6 245 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 NEURL2Q9BR09 285 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 SELENOIQ9C0D9 397 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 OR51B6Q9H340 312 aa20.89■□□□□ 0.93
SSBP4-201ENST00000270061 MRPL15Q9P015 296 aaKnown RBP20.89■□□□□ 0.93
SSBP4-201ENST00000270061 NSD1Q96L73 2696 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-201ENST00000270061 TMEM235A6NFC5 223 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 IGHV4-39P01824 125 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 MT-ND4P03905 459 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 TMEM50BP56557 158 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 RIPPLY3P57055 190 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 RSU1Q15404 277 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 OR51T1Q8NGJ9 327 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 UPRTQ96BW1 309 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 ZMAT3Q9HA38 289 aaKnown RBP20.88■□□□□ 0.93
SSBP4-201ENST00000270061 ELL3Q9HB65 397 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-201ENST00000270061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.88■□□□□ 0.93
SSBP4-201ENST00000270061 PCDHB16Q9NRJ7 776 aa20.88■□□□□ 0.93
SSBP4-201ENST00000270061 SOCS1O15524 211 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 SPRY1O43609 319 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 NDUFS7O75251 213 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 SELEP16581 610 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 CPT2P23786 658 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 RAD52P43351 418 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 BTG1P62324 171 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 CLEC12BQ2HXU8 276 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 OR1J1Q8NGS3 322 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 OR10K1Q8NGX5 313 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 RAB3CQ96E17 227 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 MRPS24Q96EL2 167 aaKnown RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 RNF170Q96K19 258 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 HIST1H2AAQ96QV6 131 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms