RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MMP24Q9Y5R2 645 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 KIAA2026Q5HYC2 2103 aa14.62□□□□□ -0.07
SQLE-201ENST00000265896 FAM24AA6NFZ4 105 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 AQP7P3A6NL99 342 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 CST7O76096 145 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 ACTBL2Q562R1 376 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 C10orf91Q5T1B1 145 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 TMEM268Q5VZI3 342 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 FAM89BQ8N5H3 189 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 UBALD1Q8TB05 177 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 SCGB3A2Q96PL1 93 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 SPENQ96T58 3664 aaKnown RBP14.61□□□□□ -0.07
SQLE-201ENST00000265896 CACNA1DQ01668 2161 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 TRAV20A0A0B4J274 112 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 H3BP45 60 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 TLX3O43711 291 aaPredicted RBP14.61□□□□□ -0.07
SQLE-201ENST00000265896 RAB30Q15771 203 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 IZUMO4Q1ZYL8 232 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 EIF2S3LQ2VIR3 472 aaKnown RBP14.61□□□□□ -0.07
SQLE-201ENST00000265896 OR5L2Q8NGL0 311 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 SLC22A8Q8TCC7 542 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 OIT3Q8WWZ8 545 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 HAS2Q92819 552 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 SRXN1Q9BYN0 137 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 OR51B6Q9H340 312 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 CHCHD2Q9Y6H1 151 aaPredicted RBP14.61□□□□□ -0.07
SQLE-201ENST00000265896 DHHO43323 396 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 CD5P06127 495 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 NPBWR2P48146 333 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 FBXW12Q6X9E4 464 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 C17orf78Q8N4C9 275 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 OR10AD1Q8NGE0 317 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 CCDC74BQ96LY2 380 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 HS3ST6Q96QI5 342 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 CHST5Q9GZS9 411 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 NELFAQ9H3P2 528 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 MOB1AQ9H8S9 216 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 IL36RNQ9UBH0 155 aa14.61□□□□□ -0.07
SQLE-201ENST00000265896 A0A0J9YW62 118 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 UMAD1C9J7I0 102 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 GSK3AP49840 483 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 AFF3P51826 1226 aaKnown RBP14.6□□□□□ -0.07
SQLE-201ENST00000265896 POLR2GP62487 172 aaKnown RBP eCLIP14.6□□□□□ -0.07
SQLE-201ENST00000265896 GRB2P62993 217 aaKnown RBP14.6□□□□□ -0.07
SQLE-201ENST00000265896 Q6ZPA2 131 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 NAT6Q93015 286 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 ZNF442Q9H7R0 627 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 SLC2A9Q9NRM0 540 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 RP1L1Q8IWN7 2480 aaPredicted RBP14.6□□□□□ -0.07
SQLE-201ENST00000265896 ARHGAP21Q5T5U3 1957 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 CD63P08962 238 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 NAT2P11245 290 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 RPS18P62269 152 aaKnown RBP14.6□□□□□ -0.07
SQLE-201ENST00000265896 RUNX1Q01196 453 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 HAGHQ16775 308 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 SSC4DQ8WTU2 575 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 SMCO4Q9NRQ5 59 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 ST3GAL6Q9Y274 331 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 MTCH2Q9Y6C9 303 aa14.6□□□□□ -0.07
SQLE-201ENST00000265896 IGHV5-10-1A0A0J9YXX1 117 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 C1orf196B1AJZ1 125 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 CCL4P13236 92 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 DVL1P1P54792 670 aaPredicted RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 RAB5BP61020 215 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 PDZD11Q5EBL8 140 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 EIF5AL1Q6IS14 154 aaKnown RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 NABP1Q96AH0 204 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 TP53RKQ96S44 253 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 PAPOLGQ9BWT3 736 aaKnown RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 FBLN5Q9UBX5 448 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 DKKL1Q9UK85 242 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 PTRH2Q9Y3E5 179 aaKnown RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 KLF2Q9Y5W3 355 aaPredicted RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 SMG1Q96Q15 3661 aaKnown RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 CRYM-AS1A6NIL9 109 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 FOXI3A8MTJ6 420 aaPredicted RBP14.59□□□□□ -0.07
SQLE-201ENST00000265896 FAM157AC9JC47 383 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 TRAPPC6AO75865 159 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 PRF1P14222 555 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 BORCS8Q96FH0 119 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 Q96M66 194 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 ZNF700Q9H0M5 742 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 IFT22Q9H7X7 185 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 ATPIF1Q9UII2 106 aa14.59□□□□□ -0.07
SQLE-201ENST00000265896 THBS4P35443 961 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 HTR5AP47898 357 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 SHBQ15464 509 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 VASH2Q86V25 355 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 CALHM1Q8IU99 346 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 MR1Q95460 341 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 GHRLQ9UBU3 117 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 ANAPC10Q9UM13 185 aa14.58□□□□□ -0.07
SQLE-201ENST00000265896 A0A096LPE4 126 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 A0A1W2PPZ6 126 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 ZNF587BE7ETH6 402 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 JTBO76095 146 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 ZNF32P17041 273 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 PTAFRP25105 342 aa14.58□□□□□ -0.08
SQLE-201ENST00000265896 ZNF343Q6P1L6 599 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms