RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TK1P04183 234 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 CEBPDP49716 269 aaPredicted RBP7.91□□□□□ -1.14
VPS41-201ENST00000265745 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 IL24Q13007 206 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 TMED1Q13445 227 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 UBE2V2Q15819 145 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 AANATQ16613 207 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 ODF4Q2M2E3 257 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 SLC35E4Q6ICL7 350 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 BATF2Q8N1L9 274 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 OR10H4Q8NGA5 316 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 OR4M1Q8NGD0 313 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 OR8J1Q8NGP2 316 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 PPP1R35Q8TAP8 253 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 EME1Q96AY2 570 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 SSX3Q99909 188 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 OSBPL10Q9BXB5 764 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 GABARAPL3Q9BY60 117 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 PKIBQ9C010 78 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 FAM234AQ9H0X4 552 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 PPA2Q9H2U2 334 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 MMP27Q9H306 513 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 TCF7L1Q9HCS4 588 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 USE1Q9NZ43 259 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 MTCH1Q9NZJ7 389 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 FBLN5Q9UBX5 448 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 OAZ3Q9UMX2 235 aa7.91□□□□□ -1.14
VPS41-201ENST00000265745 IGKV1-27A0A075B6S5 117 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 hCG_1809904A0A1W2PP81 198 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 A0A1W2PPE2 198 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 FAM230AA0A1W2PPH8 454 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 A0A1W2PR64 198 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 A0A1W2PRV1 198 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 F8VVB4 439 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 F8VWA3 439 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 H3BUX3 64 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 K7N7A8 449 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 ZNF737O75373 536 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 ALX3O95076 343 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 CCL3L1P16619 93 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 ATP6V1E1P36543 226 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 DLX6P56179 175 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 ZNF273Q14593 569 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 CRIP3Q6Q6R5 217 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 PRSS35Q8N3Z0 413 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 CCDC54Q8NEL0 328 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 TRMT10AQ8TBZ6 339 aaKnown RBP7.9□□□□□ -1.14
VPS41-201ENST00000265745 PIFOQ8TCI5 191 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 RNF141Q8WVD5 230 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 RFKQ969G6 155 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 RIBC2Q9H4K1 309 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 OR14J1Q9UGF5 321 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS41-201ENST00000265745 SLC7A11Q9UPY5 501 aa7.9□□□□□ -1.14
VPS41-201ENST00000265745 NOTCH1P46531 2555 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 FAM90A8PA6NJQ4 464 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 SAC3D1A6NKF1 404 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 C17orf98A8MV24 154 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 H3BSH0 61 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 SERPINA3P01011 423 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 CHRM2P08172 466 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 PIPP12273 146 aaPredicted RBP7.89□□□□□ -1.15
VPS41-201ENST00000265745 PAX6P26367 422 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 GABRA5P31644 462 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 KIR2DS4P43632 304 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 FUT6P51993 359 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 ISL1P61371 349 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 COL10A1Q03692 680 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 ZNF85Q03923 595 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 LRRC75BQ2VPJ9 315 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 PDLIM3Q53GG5 364 aaPredicted RBP7.89□□□□□ -1.15
VPS41-201ENST00000265745 SLC25A30Q5SVS4 291 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 RDH10Q8IZV5 341 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 TRUB1Q8WWH5 349 aaKnown RBP7.89□□□□□ -1.15
VPS41-201ENST00000265745 UBE2FQ969M7 185 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 C10orf35Q96D05 121 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 CEP19Q96LK0 163 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 ADI1Q9BV57 179 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 CHST5Q9GZS9 411 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 PLEKHA1Q9HB21 404 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 SEBOXQ9HB31 216 aaPredicted RBP7.89□□□□□ -1.15
VPS41-201ENST00000265745 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
VPS41-201ENST00000265745 VWFP04275 2813 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 TMEM82A0PJX8 343 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 VGLL3A8MV65 326 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 J3QRE1 110 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 GATBO75879 557 aaKnown RBP7.88□□□□□ -1.15
VPS41-201ENST00000265745 ZNF728P0DKX0 622 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 COX7A1P24310 79 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 KIR3DL2P43630 455 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 BMXP51813 675 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 EFNB2P52799 333 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 LGALS4P56470 323 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 CDC42P60953 191 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 LY6EQ16553 131 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 TP53I3Q53FA7 332 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 ZNF782Q6ZMW2 699 aaPredicted RBP7.88□□□□□ -1.15
VPS41-201ENST00000265745 SLC25A26Q70HW3 274 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms