RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TMPRSS13Q9BYE2 586 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 MED9Q9NWA0 146 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 RNF24Q9Y225 148 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 LY6G6EA0A0G2JKS1 128 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 ITGB2P05107 769 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 CD79AP11912 226 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 CHATP28329 748 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 RBP2P50120 134 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 C9orf135Q5VTT2 229 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 LDLRAD3Q86YD5 345 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 SULF2Q8IWU5 870 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 BCO1Q9HAY6 547 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 U3KQA8 63 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 PI3P19957 117 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 S100GP29377 79 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 MRPS34P82930 218 aaKnown RBP14.31□□□□□ -0.12
CTCF-201ENST00000264010 TXN2Q99757 166 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 CALHM2Q9HA72 323 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 CSAG2Q9Y5P2 127 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 NPTNQ9Y639 398 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 REV3LO60673 3130 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 IGHV3-9P01782 118 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 KCNMB1Q16558 191 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 STPG1Q5TH74 334 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SSX7Q7RTT5 188 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 BAP18Q8IXM2 172 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 AQP3Q92482 292 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 TOMM40LQ969M1 308 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 TRAV34A0A0B4J273 112 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 OR6C6A6NF89 314 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SERPINE3A8MV23 424 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SOCS1O15524 211 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 AVPR2P30518 371 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
CTCF-201ENST00000264010 PPP1R1AQ13522 171 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 FAM166AQ6J272 317 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 PLXDC2Q6UX71 529 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 C17orf78Q8N4C9 275 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SPSB1Q96BD6 273 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 FER1L6-AS2Q96M78 137 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SAMD10Q9BYL1 202 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 FAM166BA8MTA8 275 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 ZNF814B7Z6K7 855 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
CTCF-201ENST00000264010 OR2F2O95006 317 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 OR2F1Q13607 317 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 ZNF239Q16600 458 aaKnown RBP14.3□□□□□ -0.12
CTCF-201ENST00000264010 SLC22A25Q6T423 547 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SLC36A1Q7Z2H8 476 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 SECTM1Q8WVN6 248 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 FAM173AQ9BQD7 235 aa14.3□□□□□ -0.12
CTCF-201ENST00000264010 ETV2O00321 342 aaPredicted RBP14.29□□□□□ -0.12
CTCF-201ENST00000264010 OR2A4O95047 310 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 ZNF774Q6NX45 483 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 CPT1CQ8TCG5 803 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 OR2A7Q96R45 310 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 TLNRD1Q9H1K6 362 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 OPA3Q9H6K4 179 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 SDCBPO00560 298 aaPredicted RBP14.29□□□□□ -0.12
CTCF-201ENST00000264010 ACAA1P09110 424 aaPredicted RBP14.29□□□□□ -0.12
CTCF-201ENST00000264010 GNG10P50151 68 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 RAB4BP61018 213 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 SPIN3Q5JUX0 258 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 MITD1Q8WV92 249 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 NICN1Q9BSH3 213 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 ZNF318Q5VUA4 2279 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 CCDC187A0A096LP49 1063 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 A0A0U1RQV5 110 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 RNASEK-C17orf49H0YIS7 233 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 NRASP01111 189 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 ZNF32P17041 273 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 SLC25A42Q86VD7 318 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 KDF1Q8NAX2 398 aaPredicted RBP14.29□□□□□ -0.12
CTCF-201ENST00000264010 C10orf35Q96D05 121 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 SHARPINQ9H0F6 387 aa14.29□□□□□ -0.12
CTCF-201ENST00000264010 A0A1B0GTI1 187 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 KLF7O75840 302 aaPredicted RBP14.28□□□□□ -0.12
CTCF-201ENST00000264010 CD46P15529 392 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 NDUFB7P17568 137 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 ECI1P42126 302 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 C10orf128Q5T292 105 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 FAM27BQ5VT28 67 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 FAHD2BQ6P2I3 314 aaPredicted RBP14.28□□□□□ -0.12
CTCF-201ENST00000264010 FAHD2AQ96GK7 314 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 LPAR5Q9H1C0 372 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 LOC390937A0A1W2PQ73 354 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 C9orf170A2RU37 121 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 MASP2O00187 686 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 CFPP27918 469 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 OR8G1Q15617 311 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 HAGHQ16775 308 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 TMEM128Q5BJH2 165 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 OR10S1Q8NGN2 331 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 IP6K3Q96PC2 410 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 A0A1W2PPE2 198 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 CD74P04233 296 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 CST2P09228 141 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 JMJD6Q6NYC1 403 aaPredicted RBP14.28□□□□□ -0.12
CTCF-201ENST00000264010 ACOT7LQ6ZUV0 252 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms