RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 OR11L1Q8NGX0 322 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 PARPBPQ9NWS1 579 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
LIG1-201ENST00000263274 PUS1Q9Y606 427 aaKnown RBP eCLIP11.06□□□□□ -0.64
LIG1-201ENST00000263274 EP300Q09472 2414 aaPredicted RBP11.06□□□□□ -0.64
LIG1-201ENST00000263274 CST4P01036 141 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 B4GALT1P15291 398 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 HERV-K104P61576 105 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 RABEPKQ7Z6M1 372 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 NELFAQ9H3P2 528 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 EML6Q6ZMW3 1958 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 SERPINE3A8MV23 424 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 JTBO76095 146 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 CCL3P10147 92 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 CD37P11049 281 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 HTR5AP47898 357 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 PLXDC2Q6UX71 529 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 FBXL14Q8N1E6 418 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 RHOVQ96L33 236 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 MAGT1Q9H0U3 335 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 AK3Q9UIJ7 227 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 ANXA10Q9UJ72 324 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 RIF1Q5UIP0 2472 aaKnown RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 ZNF407Q9C0G0 2248 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PNV4 684 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 PMS2P1A4D2B8 440 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 GEMIN2O14893 280 aaKnown RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 CFIP05156 583 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 H2AFB1P0C5Y9 115 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 ZNF44P15621 663 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 MPZP25189 248 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 NHLH2Q02577 135 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 SHBQ15464 509 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 DHRS7BQ6IAN0 325 aaPredicted RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 BEND4Q6ZU67 534 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 GUCD1Q96NT3 240 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 CHRNA10Q9GZZ6 450 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 PRO3102Q9H379 93 aa11.05□□□□□ -0.64
LIG1-201ENST00000263274 FAM212BQ9NTI7 297 aaPredicted RBP11.05□□□□□ -0.64
LIG1-201ENST00000263274 TRBV6-7A0A0A0MS04 114 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 AQP7P3A6NL99 342 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 C5orf24Q7Z6I8 188 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 CA5BP1Q8WTZ4 195 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 HAS2Q92819 552 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 S100PBPQ96BU1 408 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 IP6K3Q96PC2 410 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 UBE2ZQ9H832 354 aaPredicted RBP11.04□□□□□ -0.64
LIG1-201ENST00000263274 UFSP2Q9NUQ7 469 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 TMEM100Q9NV29 134 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 MRPS17Q9Y2R5 130 aaKnown RBP11.04□□□□□ -0.64
LIG1-201ENST00000263274 HDGFL3Q9Y3E1 203 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 EDN3P14138 238 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 ACKR3P25106 362 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 THBS4P35443 961 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 PPA1Q15181 289 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 FAM24BQ8N5W8 94 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 TMEM217Q8N7C4 229 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 HLA-CQ95604 372 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 SAT2Q96F10 170 aaPredicted RBP11.04□□□□□ -0.64
LIG1-201ENST00000263274 CCDC74BQ96LY2 380 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 CRLF2Q9HC73 371 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 DIDO1Q9BTC0 2240 aaKnown RBP11.04□□□□□ -0.64
LIG1-201ENST00000263274 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
LIG1-201ENST00000263274 A6NLC8 198 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 TAAR5O14804 337 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 PTGDSP41222 190 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 GLP1RP43220 463 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 RAB2AP61019 212 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 HABP2Q14520 560 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 ZNF529Q6P280 563 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 LHFPL1Q86WI0 220 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 OR14L1PQ8NHC6 308 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 SHDQ96IW2 340 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 KCNJ16Q9NPI9 418 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 WNT16Q9UBV4 365 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 ST3GAL6Q9Y274 331 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 CARHSP1Q9Y2V2 147 aaKnown RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PQM1 296 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PR64 198 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 MBPP02686 304 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 NR2C1P13056 603 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 G0S2P27469 103 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 GUK1Q16774 197 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 PLCXD3Q63HM9 321 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 P4HA3Q7Z4N8 544 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms