RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DEDDO75618 318 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 IGKV1D-12P01611 117 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 CD63P08962 238 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 ZNF44P15621 663 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 HTR5AP47898 357 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 SRYQ05066 204 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 FAM24BQ8N5W8 94 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 FAM213BQ8TBF2 198 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 NABP1Q96AH0 204 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 BORCS8Q96FH0 119 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 RARRES2Q99969 163 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 BIN3Q9NQY0 253 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
MSH4-201ENST00000263187 A0A096LPE4 126 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PPE2 198 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 COLCA2A8K830 154 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 SGCEO43556 437 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 CST4P01036 141 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 S100A6P06703 90 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 FCGR3AP08637 254 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 NAT2P11245 290 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 PRF1P14222 555 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 MSX1P28360 303 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 NPBWR2P48146 333 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 AWAT1Q58HT5 328 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 NSUN5P2Q63ZY6 315 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 IL34Q6ZMJ4 242 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 OR10AD1Q8NGE0 317 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 MAFAQ8NHW3 353 aaPredicted RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 SFT2D1Q8WV19 159 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 HLA-CQ95604 372 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 RGCCQ9H4X1 137 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 FBLN5Q9UBX5 448 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 NPIPB13A6NJU9 1138 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 SERPINE3A8MV23 424 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 NPIPB4C9JG80 1138 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 TP53I11O14683 189 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 TXNL1O43396 289 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 ZIC3O60481 467 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 FBP1P09467 338 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 ZNF32P17041 273 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 PPP1CCP36873 323 aaKnown RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 TLE1Q04724 770 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 IL15RAQ13261 267 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 HIST3H3Q16695 136 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 BTNL8Q6UX41 500 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 FBXW12Q6X9E4 464 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 OR6S1Q8NH40 331 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 OR14L1PQ8NHC6 308 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 UBALD1Q8TB05 177 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 HS3ST6Q96QI5 342 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 PAPOLGQ9BWT3 736 aaKnown RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 METTL9Q9H1A3 318 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 IL36RNQ9UBH0 155 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 DCHS1Q96JQ0 3298 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 IGLV3-12A0A075B6K2 115 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 FAM24AA6NFZ4 105 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 PATE3B3GLJ2 98 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 CXCL13O43927 109 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 CST7O76096 145 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 RFPL3SP0C7P2 107 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 CCL1P22362 96 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 THBS4P35443 961 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 SULT1A2P50226 295 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 HABP2Q14520 560 aaPredicted RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 PLCXD3Q63HM9 321 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 EIF5AL1Q6IS14 154 aaKnown RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 P4HA3Q7Z4N8 544 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 VASH2Q86V25 355 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 ZIC4Q8N9L1 334 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 ZFP62Q8NB50 900 aaPredicted RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 SSC4DQ8WTU2 575 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 SPTSSAQ969W0 71 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 Q96M66 194 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 PHF7Q9BWX1 381 aaPredicted RBP7.93□□□□□ -1.14
MSH4-201ENST00000263187 SLC2A9Q9NRM0 540 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 KCNIP3Q9Y2W7 256 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 HDGFL3Q9Y3E1 203 aa7.93□□□□□ -1.14
MSH4-201ENST00000263187 RP1L1Q8IWN7 2480 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 KIAA2026Q5HYC2 2103 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 CRYM-AS1A6NIL9 109 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 FOXI3A8MTJ6 420 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 ZNF92Q03936 586 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 GUK1Q16774 197 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 TMEM268Q5VZI3 342 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 CALHM1Q8IU99 346 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 COA4Q9NYJ1 87 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 CACFD1Q9UGQ2 172 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 ZDHHC8Q9ULC8 765 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 ANAPC10Q9UM13 185 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 URGCP-MRPS24S4R325 110 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 CACNA1DQ01668 2161 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 ZNF587BE7ETH6 402 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 H3BP45 60 aa7.92□□□□□ -1.14
MSH4-201ENST00000263187 ZNF14P17017 642 aaPredicted RBP7.92□□□□□ -1.14
MSH4-201ENST00000263187 AADACP22760 399 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms