RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 FBLN5Q9UBX5 448 aa8.77□□□□□ -1
LIG3-201ENST00000262327 ZNF850A8MQ14 1090 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 NR2C1P13056 603 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 SPINK2P20155 84 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 CPT2P23786 658 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 CCL7P80098 99 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 LPAL2Q16609 132 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 RSPO1Q2MKA7 263 aaPredicted RBP8.77□□□□□ -1.01
LIG3-201ENST00000262327 C10orf91Q5T1B1 145 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 OR6X1Q8NH79 312 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 OXGR1Q96P68 337 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 RASL10BQ96S79 203 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 DEFB126Q9BYW3 111 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.77□□□□□ -1.01
LIG3-201ENST00000262327 PISDQ9UG56 409 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 COL6A3P12111 3177 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 C1orf196B1AJZ1 125 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 ADH6P28332 368 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 CSNK1A1P48729 337 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 MTCP1P56278 107 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 PIGPP57054 158 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 TAS2R46P59540 309 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 IL15RAQ13261 267 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 ACTBL2Q562R1 376 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 RAET1LQ5VY80 246 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 IL34Q6ZMJ4 242 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 LYZL2Q7Z4W2 148 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 CPEB2Q7Z5Q1 589 aaKnown RBP8.77□□□□□ -1.01
LIG3-201ENST00000262327 OR5L1Q8NGL2 311 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 IFI44Q8TCB0 444 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 EMG1Q92979 244 aaKnown RBP8.77□□□□□ -1.01
LIG3-201ENST00000262327 KIRREL1Q96J84 757 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 SMIM8Q96KF7 97 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 IP6K3Q96PC2 410 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 SCGB3A2Q96PL1 93 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 GPHA2Q96T91 129 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 NAA11Q9BSU3 229 aaPredicted RBP8.77□□□□□ -1.01
LIG3-201ENST00000262327 MOB1AQ9H8S9 216 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 ANAPC10Q9UM13 185 aa8.77□□□□□ -1.01
LIG3-201ENST00000262327 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
LIG3-201ENST00000262327 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 PRR33A8MZF0 331 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 ZFAND5O76080 213 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 ACKR3P25106 362 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 PPP1R3BQ86XI6 285 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 SGPP2Q8IWX5 399 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 HSD17B11Q8NBQ5 300 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 OR11L1Q8NGX0 322 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 MARS2Q96GW9 593 aaKnown RBP8.76□□□□□ -1.01
LIG3-201ENST00000262327 GGACTQ9BVM4 153 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 C1orf123Q9NWV4 160 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 PI4KAP42356 2102 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 A0A1W2PQM1 296 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 M0R036 132 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 FCGR3AP08637 254 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 OR5AC1P0C628 307 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 OR5H8P0DN80 308 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 ZNF44P15621 663 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 G0S2P27469 103 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 SUMO3P55854 103 aaPredicted RBP8.76□□□□□ -1.01
LIG3-201ENST00000262327 ENDOGQ14249 297 aaKnown RBP8.76□□□□□ -1.01
LIG3-201ENST00000262327 MIDNQ504T8 468 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 KRBOX4Q5JUW0 171 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 FAM89BQ8N5H3 189 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 RNASE11Q8TAA1 199 aaKnown RBP8.76□□□□□ -1.01
LIG3-201ENST00000262327 SSC4DQ8WTU2 575 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 PRRX2Q99811 253 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 PADI1Q9ULC6 663 aa8.76□□□□□ -1.01
LIG3-201ENST00000262327 COLCA2A8K830 154 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 CEACAM18A8MTB9 384 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 M0R135 149 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 PET100P0DJ07 73 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 ITGA3P26006 1051 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 CLINT1Q14677 625 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 PIGYQ3MUY2 71 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 BTNL8Q6UX41 500 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 SLC25A43Q8WUT9 341 aaPredicted RBP8.75□□□□□ -1.01
LIG3-201ENST00000262327 ZNF799Q96GE5 643 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 RSRP1Q9BUV0 290 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 TGIF2Q9GZN2 237 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
LIG3-201ENST00000262327 WFDC1Q9HC57 220 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 AK3Q9UIJ7 227 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 R4GN57 208 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 ZNF407Q9C0G0 2248 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 IGHV5-10-1A0A0J9YXX1 117 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 CXorf65A6NEN9 183 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 AQP7P3A6NL99 342 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 DHRS3O75911 302 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 NXPH3O95157 252 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 ARG1P05089 322 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 LYL1P12980 280 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 MSR1P21757 451 aa8.75□□□□□ -1.01
LIG3-201ENST00000262327 SULT1A2P50226 295 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms