RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PPP1R3CQ9UQK1 317 aa9.74□□□□□ -0.85
PFDN1-201ENST00000261813 TANC2Q9HCD6 1990 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 IGHV4-61A0A0C4DH41 118 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 FAM230AA0A1W2PPH8 454 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 SCGNO76038 276 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 APOA1P02647 267 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 ARSBP15848 533 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 TALDO1P37837 337 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 PTGFRP43088 359 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 GPR6P46095 362 aaPredicted RBP9.73□□□□□ -0.85
PFDN1-201ENST00000261813 TMEM33P57088 247 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 LSAMPQ13449 338 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 HES5Q5TA89 166 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 FAM166AQ6J272 317 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 OR2W3Q7Z3T1 314 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 NR2C2APQ86WQ0 139 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 ANGPTL5Q86XS5 388 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 LYPD6Q86Y78 171 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 MKXQ8IYA7 352 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 SAXO1Q8IYX7 474 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 MAPK1IP1LQ8NDC0 245 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 PXT1Q8NFP0 134 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 OR6Q1Q8NGQ2 317 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 TRMT10AQ8TBZ6 339 aaKnown RBP9.73□□□□□ -0.85
PFDN1-201ENST00000261813 RAB40AQ8WXH6 277 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 FAM3DQ96BQ1 224 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 COX4I2Q96KJ9 171 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 GFI1Q99684 422 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 CST11Q9H112 138 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 CNTD2Q9H8S5 307 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 TMEM106BQ9NUM4 274 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 UFSP2Q9NUQ7 469 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 COMMD3Q9UBI1 195 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 FBLN5Q9UBX5 448 aa9.73□□□□□ -0.85
PFDN1-201ENST00000261813 PQLC2LA1A4F0 135 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 SMIM30A4D0T7 59 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 METTL21EPA6NDL7 271 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 ZNF732B4DXR9 585 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 CLDN25C9JDP6 229 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 H3BUI4 141 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 WNT9BO14905 357 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 PPIHO43447 177 aaKnown RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 TPPPO94811 219 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 CYB5R3P00387 301 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 GRPP07492 148 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 SLC2A2P11168 524 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 RAB6AP20340 208 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 PTBP1P26599 531 aaKnown RBP eCLIP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 HOXA4Q00056 320 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 ZNF45Q02386 682 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 ZNF154Q13106 437 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 C2orf76Q3KRA6 126 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 FAM76BQ5HYJ3 339 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 SPANXN2Q5MJ10 180 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 AVPI1Q5T686 147 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 AWAT2Q6E213 333 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 METAP1DQ6UB28 335 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 ZNF826PQ6ZT77 177 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 BIVMQ86UB2 503 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 C11orf53Q8IXP5 236 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 KCNG3Q8TAE7 436 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 TBC1D15Q8TC07 691 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 Q8TCH9 128 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 C15orf40Q8WUR7 153 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 ERGIC1Q969X5 290 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 PHF21AQ96BD5 680 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 MRPS24Q96EL2 167 aaKnown RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 S100A16Q96FQ6 103 aaKnown RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 WDFY2Q96P53 400 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 PKIBQ9C010 78 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 METTL9Q9H1A3 318 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 GSX1Q9H4S2 264 aaPredicted RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 HMG20AQ9NP66 347 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 RAB22AQ9UL26 194 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 MRPS28Q9Y2Q9 187 aaKnown RBP9.72□□□□□ -0.85
PFDN1-201ENST00000261813 POLDIP2Q9Y2S7 368 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 WIPI2Q9Y4P8 454 aa9.72□□□□□ -0.85
PFDN1-201ENST00000261813 A0A0A6YYH2 397 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 LRP5LA4QPB2 252 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 A6NJ64 397 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 TMEM178BH3BS89 294 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.86
PFDN1-201ENST00000261813 KDM4BO94953 1096 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 TMEM225BP0DP42 221 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 USF1P22415 310 aaPredicted RBP9.71□□□□□ -0.86
PFDN1-201ENST00000261813 LOXL1Q08397 574 aaPredicted RBP9.71□□□□□ -0.86
PFDN1-201ENST00000261813 PDZK1IP1Q13113 114 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 ZNF181Q2M3W8 571 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 UBE2NLQ5JXB2 153 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 RAB12Q6IQ22 244 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 GLIPR1L1Q6UWM5 242 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 BAIAP2L2Q6UXY1 529 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 ASCL4Q6XD76 172 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 SAMD12Q8N8I0 201 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 TNFAIP8L1Q8WVP5 186 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 C18orf12Q96KH6 178 aa9.71□□□□□ -0.86
PFDN1-201ENST00000261813 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms