RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NFYBP25208 207 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 ID4P47928 161 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 F2RL1P55085 397 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 CARD18P57730 90 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 PIGYQ3MUY2 71 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 ABCA11PQ4W5N1 156 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 OR10AD1Q8NGE0 317 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 ERGIC1Q969X5 290 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 MARS2Q96GW9 593 aaKnown RBP13.23□□□□□ -0.29
DDX56-201ENST00000258772 RFC3P40938 356 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 FXYD4P59646 89 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 KRTAP27-1Q3LI81 207 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 Q6ZRG5 221 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 LYPD6BQ8NI32 183 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 FAM221AA4D161 298 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 ZNF716A6NP11 495 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 C9JQL5 133 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 E5RGE8 158 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 SRD5A2P31213 254 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 CD80P33681 288 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 HTR5AP47898 357 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 PSG4Q00888 419 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 PDZK1IP1Q13113 114 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 FAM76BQ5HYJ3 339 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 PMS2CLQ68D20 193 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 AAED1Q7RTV5 226 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 LYZL2Q7Z4W2 148 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 FBXL14Q8N1E6 418 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 OSR2Q8N2R0 312 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 ALKBH3Q96Q83 286 aaPredicted RBP13.22□□□□□ -0.29
DDX56-201ENST00000258772 BCO1Q9HAY6 547 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 NSG2Q9Y328 171 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 POMT1Q9Y6A1 747 aa13.22□□□□□ -0.29
DDX56-201ENST00000258772 A0A0G2JMM0 328 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 A0A1W2PPB8 328 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 A0A1W2PRS3 328 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 KIR3DP1A8MWS1 328 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 DVL1P1P54792 670 aaPredicted RBP13.21□□□□□ -0.29
DDX56-201ENST00000258772 TSPO2Q5TGU0 170 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 CLEC9AQ6UXN8 241 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 GGNQ86UU5 652 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 NAXEQ8NCW5 288 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 OR14L1PQ8NHC6 308 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
DDX56-201ENST00000258772 SUCNR1Q9BXA5 334 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 ARV1Q9H2C2 271 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 ZNF391Q9UJN7 358 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 ST3GAL6Q9Y274 331 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 TIMM10BQ9Y5J6 103 aa13.21□□□□□ -0.29
DDX56-201ENST00000258772 TNRC6BQ9UPQ9 1833 aaKnown RBP13.21□□□□□ -0.29
DDX56-201ENST00000258772 FAM157AC9JC47 383 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 OR8U9P0C7N5 309 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 ZNF92Q03936 586 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 PHLDA2Q53GA4 152 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 SLC22A25Q6T423 547 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 OR8U1Q8NH10 309 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 SLC2A9Q9NRM0 540 aa13.21□□□□□ -0.3
DDX56-201ENST00000258772 H7C1Q1 480 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 NTN3O00634 580 aaPredicted RBP13.2□□□□□ -0.3
DDX56-201ENST00000258772 CXCL13O43927 109 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 RGS19P49795 217 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 RAB13P51153 203 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 FUT6P51993 359 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 LIAT1Q6ZQX7 453 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 ZNF100Q8IYN0 542 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 FGFBP3Q8TAT2 258 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 HLA-CQ95604 372 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 C18orf12Q96KH6 178 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 FOXB1Q99853 325 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 WNT5BQ9H1J7 359 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 RGCCQ9H4X1 137 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
DDX56-201ENST00000258772 IL36GQ9NZH8 169 aa13.2□□□□□ -0.3
DDX56-201ENST00000258772 hCG_38984A0A1B0GV85 526 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 DIRAS3O95661 229 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 P04436 131 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 CFIP05156 583 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 GLI4P10075 376 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 FOLR3P41439 243 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 ZFP36L1Q07352 338 aaKnown RBP13.19□□□□□ -0.3
DDX56-201ENST00000258772 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDX56-201ENST00000258772 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 RXFP4Q8TDU9 374 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
DDX56-201ENST00000258772 ZNF286AQ9HBT8 521 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 MEX3AA1L020 520 aaKnown RBP13.19□□□□□ -0.3
DDX56-201ENST00000258772 CCDC85CA6NKD9 419 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 CRYBA1P05813 215 aa13.19□□□□□ -0.3
DDX56-201ENST00000258772 RFPL3SP0C7P2 107 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms