RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ADH6P28332 368 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 GABRA2P47869 451 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 CAV2P51636 162 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 CLDN18P56856 261 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 PIGPP57054 158 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 FAM3AP98173 230 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 MEF2DQ14814 521 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 IAH1Q2TAA2 248 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-201ENST00000258607 FAM27BQ5VT28 67 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 TMUB2Q71RG4 321 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 HRH4Q9H3N8 390 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 FN3KRPQ9HA64 309 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 UBQLN2Q9UHD9 624 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 C14orf166Q9Y224 244 aaKnown RBP7.86□□□□□ -1.15
CKAP2-201ENST00000258607 RCL1Q9Y2P8 373 aaKnown RBP7.86□□□□□ -1.15
CKAP2-201ENST00000258607 MAB21L2Q9Y586 359 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 ONECUT2O95948 504 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 SCTP09683 121 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 AKR1C3P42330 323 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 HERV-K104P61576 105 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 ECH1Q13011 328 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 HACD4Q5VWC8 232 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 IQCF2Q8IXL9 164 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 HSD17B11Q8NBQ5 300 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 OR13G1Q8NGZ3 307 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 LRRC20Q8TCA0 184 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 EMG1Q92979 244 aaKnown RBP7.86□□□□□ -1.15
CKAP2-201ENST00000258607 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.86□□□□□ -1.15
CKAP2-201ENST00000258607 PPP1R3CQ9UQK1 317 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 TANC2Q9HCD6 1990 aa7.86□□□□□ -1.15
CKAP2-201ENST00000258607 IGHV3OR15-7A0A075B7D8 119 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 GP1BAP07359 652 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 NME2P22392 152 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 MRPS34P82930 218 aaKnown RBP7.85□□□□□ -1.15
CKAP2-201ENST00000258607 RAB32Q13637 225 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 CLEC18BQ6UXF7 455 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 PEG10Q86TG7 708 aaKnown RBP7.85□□□□□ -1.15
CKAP2-201ENST00000258607 PRRT1Q99946 306 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 KLF13Q9Y2Y9 288 aaPredicted RBP7.85□□□□□ -1.15
CKAP2-201ENST00000258607 A0A087WZY1 265 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 A0A1W2PPE3 182 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 KANTRA0A1W2PQU2 76 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 MSGN1A6NI15 193 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 TRAPPC2LH3BP13 241 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 RAB35Q15286 201 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 MPPED2Q15777 294 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 ANKRD55Q3KP44 614 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 CDH26Q8IXH8 852 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 ZFP62Q8NB50 900 aaPredicted RBP7.85□□□□□ -1.15
CKAP2-201ENST00000258607 SLC30A7Q8NEW0 376 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OR10C1Q96KK4 312 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 DCTN5Q9BTE1 182 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 M0R1B8 84 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 SYNGR3O43761 229 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OR2F2O95006 317 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 NXPH2O95156 264 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 BPNT1O95861 308 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 IGHMP01871 453 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 NR2C1P13056 603 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 S100A1P23297 94 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 S100A11P31949 105 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 GFRA1P56159 465 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 BTN1A1Q13410 526 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 ZBTB37Q5TC79 503 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 C11orf87Q6NUJ2 197 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 GSG1LQ6UXU4 331 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 BEND4Q6ZU67 534 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OSR2Q8N2R0 312 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 TMEM185AQ8NFB2 350 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OR6S1Q8NH40 331 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 TERB2Q8NHR7 220 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 GTF3AQ92664 365 aaKnown RBP7.85□□□□□ -1.15
CKAP2-201ENST00000258607 CHST5Q9GZS9 411 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 C5orf66Q9H5L9 145 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 TAS2R3Q9NYW6 316 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 OR5AC2Q9NZP5 309 aa7.85□□□□□ -1.15
CKAP2-201ENST00000258607 NAP1L6A6NFF2 107 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 CD300LBA8K4G0 201 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ZNF705EA8MWA4 302 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 TM4SF5O14894 197 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 GSTZ1O43708 216 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 C1QL1O75973 258 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 OR5AC1P0C628 307 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 HOXA6P31267 233 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 PRR30Q53SZ7 412 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 DEGS2Q6QHC5 323 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 SSX9Q7RTT3 188 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 LYZL2Q7Z4W2 148 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ADPRHL1Q8NDY3 354 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 OR52H1Q8NGJ2 320 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 SNIP1Q8TAD8 396 aaKnown RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 LEAP2Q969E1 77 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 MRPL24Q96A35 216 aaKnown RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 SLC5A7Q9GZV3 580 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 EMC3Q9P0I2 261 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 FOXD3Q9UJU5 478 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ANKRD30BLA7E2S9 258 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms