RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SHDQ96IW2 340 aa11.77□□□□□ -0.52
VHL-201ENST00000256474 SRXN1Q9BYN0 137 aa11.77□□□□□ -0.52
VHL-201ENST00000256474 UBE2J1Q9Y385 318 aaPredicted RBP11.77□□□□□ -0.52
VHL-201ENST00000256474 HDGFL3Q9Y3E1 203 aa11.77□□□□□ -0.52
VHL-201ENST00000256474 ATXN7O15265 892 aaPredicted RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 NRASP01111 189 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 HLA-GP17693 338 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 CEACAM16Q2WEN9 425 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 HLA-BQ31612 363 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 MYPOPQ86VE0 399 aaPredicted RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 ZFP62Q8NB50 900 aaPredicted RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 HAS2Q92819 552 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 CHCHD2Q9Y6H1 151 aaPredicted RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 NUP210LQ5VU65 1888 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 SSR4P51571 173 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 TMEM268Q5VZI3 342 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 RPUSD3Q6P087 351 aaKnown RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 ESRP2Q9H6T0 727 aaKnown RBP11.77□□□□□ -0.53
VHL-201ENST00000256474 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.53
VHL-201ENST00000256474 TRAV39A0A0B4J263 110 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 EIF1P41567 113 aaKnown RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 GLP1RP43220 463 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 RBP2P50120 134 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 CARD18P57730 90 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 IGSF11Q5DX21 431 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 SLC23A3Q6PIS1 610 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 NAA11Q9BSU3 229 aaPredicted RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 FGF16O43320 207 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 HGFACQ04756 655 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 SPEM2Q0P670 501 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 IFI44Q8TCB0 444 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 ADAMTS17Q8TE56 1095 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 CHST5Q9GZS9 411 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 F8VVB4 439 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 F8VWA3 439 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 HSD17B6O14756 317 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 CD79AP11912 226 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 EDN3P14138 238 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 THBS4P35443 961 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 NPBWR2P48146 333 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 FAM189A2Q15884 450 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 HAGHQ16775 308 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 OPN5Q6U736 354 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 RBMS3Q6XE24 437 aaKnown RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 SLC25A43Q8WUT9 341 aaPredicted RBP11.76□□□□□ -0.53
VHL-201ENST00000256474 KIAA2026Q5HYC2 2103 aa11.76□□□□□ -0.53
VHL-201ENST00000256474 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
VHL-201ENST00000256474 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
VHL-201ENST00000256474 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 SLC7A11Q9UPY5 501 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 ARPC4-TTLL3A0A0A6YYG9 625 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 BORCS7-ASMTA0A0B4J1R7 106 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 WRBO00258 174 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 SSSCA1O60232 199 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 CST4P01036 141 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 GDF1P27539 372 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 AWAT1Q58HT5 328 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 KMT5CQ86Y97 462 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 AQP10Q96PS8 301 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 C1orf196B1AJZ1 125 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 P04436 131 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 RFPL3SP0C7P2 107 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 RAB5BP61020 215 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 PP6455Q8WZ26 134 aa11.75□□□□□ -0.53
VHL-201ENST00000256474 A0A1W2PPE2 198 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 FIGNL2A6NMB9 653 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
VHL-201ENST00000256474 MALLQ13021 153 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 GNMTQ14749 295 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 GUK1Q16774 197 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 TDHQ8IZJ6 230 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 ZNF565Q8N9K5 539 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 ABHD14AQ9BUJ0 271 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 SEC11CQ9BY50 192 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 FAM212BQ9NTI7 297 aaPredicted RBP11.74□□□□□ -0.53
VHL-201ENST00000256474 CNOT1A5YKK6 2376 aaKnown RBP11.74□□□□□ -0.53
VHL-201ENST00000256474 JTBO76095 146 aa11.74□□□□□ -0.53
VHL-201ENST00000256474 RPS2P15880 293 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms