RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 PDCD1Q15116 288 aa20.69■□□□□ 0.9
LSM7-201ENST00000252622 GPR157Q5UAW9 335 aa20.69■□□□□ 0.9
LSM7-201ENST00000252622 PHC2Q8IXK0 858 aa20.69■□□□□ 0.9
LSM7-201ENST00000252622 ZFAND2BQ8WV99 257 aa20.69■□□□□ 0.9
LSM7-201ENST00000252622 MS4A7Q9GZW8 240 aaPredicted RBP20.69■□□□□ 0.9
LSM7-201ENST00000252622 SIRT4Q9Y6E7 314 aaPredicted RBP20.69■□□□□ 0.9
LSM7-201ENST00000252622 TRBV23-1A0A0A0MS06 115 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 F8VVB4 439 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 F8VWA3 439 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 SULT1B1O43704 296 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 RGS9O75916 674 aaPredicted RBP20.68■□□□□ 0.9
LSM7-201ENST00000252622 DMKNQ6E0U4 476 aaPredicted RBP20.68■□□□□ 0.9
LSM7-201ENST00000252622 CMTM4Q8IZR5 234 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 SPATA3Q8NHX4 192 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 OR14J1Q9UGF5 321 aa20.68■□□□□ 0.9
LSM7-201ENST00000252622 CD2P06729 351 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 C21orf33P30042 268 aaPredicted RBP20.67■□□□□ 0.9
LSM7-201ENST00000252622 CEBPDP49716 269 aaPredicted RBP20.67■□□□□ 0.9
LSM7-201ENST00000252622 CAPZA1P52907 286 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 TAS2R43P59537 309 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 PDZK1IP1Q13113 114 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 RIPK1Q13546 671 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 C6orf141Q5SZD1 244 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 ZNF529Q6P280 563 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 BCL6BQ8N143 479 aaPredicted RBP20.67■□□□□ 0.9
LSM7-201ENST00000252622 C19orf24Q9BVV8 132 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 ANKRD60Q9BZ19 345 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 SEBOXQ9HB31 216 aaPredicted RBP20.67■□□□□ 0.9
LSM7-201ENST00000252622 ONECUT1Q9UBC0 465 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 ZNF281Q9Y2X9 895 aa20.67■□□□□ 0.9
LSM7-201ENST00000252622 MYL12BO14950 172 aa20.66■□□□□ 0.9
LSM7-201ENST00000252622 MYF6P23409 242 aa20.66■□□□□ 0.9
LSM7-201ENST00000252622 RBMS3Q6XE24 437 aaKnown RBP20.66■□□□□ 0.9
LSM7-201ENST00000252622 SIGLECL1Q8N7X8 197 aa20.66■□□□□ 0.9
LSM7-201ENST00000252622 EMG1Q92979 244 aaKnown RBP20.66■□□□□ 0.9
LSM7-201ENST00000252622 FAM234AQ9H0X4 552 aa20.66■□□□□ 0.9
LSM7-201ENST00000252622 ELL3Q9HB65 397 aaPredicted RBP20.66■□□□□ 0.9
LSM7-201ENST00000252622 CENPVL3A0A0U1RRI6 287 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 SPRY1O43609 319 aaPredicted RBP20.65■□□□□ 0.9
LSM7-201ENST00000252622 HCKP08631 526 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 SOX2P48431 317 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 HSPA13P48723 471 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 WNT4P56705 351 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 RNLSQ5VYX0 342 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 CRIP3Q6Q6R5 217 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 FIP1L1Q6UN15 594 aaKnown RBP20.65■□□□□ 0.9
LSM7-201ENST00000252622 VMO1Q7Z5L0 202 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 SAXO1Q8IYX7 474 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 GHSRQ92847 366 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 RFT1Q96AA3 541 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 ZNF48Q96MX3 618 aaPredicted RBP20.65■□□□□ 0.9
LSM7-201ENST00000252622 SPACA5Q96QH8 159 aa20.65■□□□□ 0.9
LSM7-201ENST00000252622 RBFOX1Q9NWB1 397 aaKnown RBP20.65■□□□□ 0.9
LSM7-201ENST00000252622 A0A1W2PQ09 198 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 M0R1W7 72 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 KDM4BO94953 1096 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 INMTO95050 263 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 CDK1P06493 297 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 CHRM2P08172 466 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 RAB3AP20336 220 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 BCL3P20749 454 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 NPBWR2P48146 333 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 ASPHD2Q6ICH7 369 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 IZUMO2Q6UXV1 221 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 BRD3OSQ6XYD6 125 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 C1orf122Q6ZSJ8 110 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 RNF144BQ7Z419 303 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 FAM58AQ8N1B3 248 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 NANOGP1Q8N7R0 232 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 ZDHHC22Q8N966 263 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 TMEM106AQ96A25 262 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 CPNE2Q96FN4 548 aaPredicted RBP20.64■□□□□ 0.89
LSM7-201ENST00000252622 PGLYRP3Q96LB9 341 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 RHOFQ9HBH0 211 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 ESM1Q9NQ30 184 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 SCN3BQ9NY72 215 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 TAS2R4Q9NYW5 299 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 ERGIC3Q9Y282 383 aa20.64■□□□□ 0.89
LSM7-201ENST00000252622 IGKV1-12A0A0C4DH73 117 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 TRBV5-5A0A0J9YX44 114 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 TRIM77I1YAP6 450 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 ANGPTL7O43827 346 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 ZNF737O75373 536 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 ATP6V1G2O95670 118 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 IGKV1D-12P01611 117 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 TK1P04183 234 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 ZP1P60852 638 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 COL10A1Q03692 680 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 KISS1Q15726 138 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 YIF1BQ5BJH7 314 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 SPIN3Q5JUX0 258 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 METAP1DQ6UB28 335 aaPredicted RBP20.63■□□□□ 0.89
LSM7-201ENST00000252622 ZSCAN4Q8NAM6 433 aaPredicted RBP20.63■□□□□ 0.89
LSM7-201ENST00000252622 OR5D18Q8NGL1 313 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 LHX4Q969G2 390 aa20.63■□□□□ 0.89
LSM7-201ENST00000252622 IGHV1-69DA0A0B4J2H0 117 aa20.62■□□□□ 0.89
LSM7-201ENST00000252622 K7N7A8 449 aa20.62■□□□□ 0.89
LSM7-201ENST00000252622 IGHV1-69P01742 117 aa20.62■□□□□ 0.89
LSM7-201ENST00000252622 ZNF146Q15072 292 aa20.62■□□□□ 0.89
LSM7-201ENST00000252622 FAM185AQ8N0U4 392 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms